Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy4g2479 ATGGTGCCAACAGTTCTATGTGGTGCTTCTTACACTACTTGCAACTGTTCTGAGATTATGAGAAGACCTAGAAATATTGGCGTGCATTTTGGGAAGAGTAGTGGCTTCAGAAGAGGTGTATCAGAGTATAGGGGTGTTGCAAGGCATCACCATAATGGAAGATGGGAAGCAAGGATAAGAAGAGTTCTTGGAAACAAATATCTTTACCTTGGAACCTGCACACAAGAGGAAGCAGCACGAGCCTATGACAAAGCAGCAATTGAGTACAGAGGAATTCATGCTGTCACCAACTTTGATTTAAGTCATTACATAACATGGTTGAAGCCTTCACACCAAAACTCCCAAGACCCTAAACCTGAAACAGAAGTAGTACTAAACTCTCAAACACTCACTTCTCCATCCAACTATGCTCCAAATCCAATACAACATTCAAAACCATTGCCTTTTGACAATACCTCTTACATCAGTCTTGATCACCTGAATTATCCTGAAAAATCAAGAAGTCTTTGA 510 0.4059 MVPTVLCGASYTTCNCSEIMRRPRNIGVHFGKSSGFRRGVSEYRGVARHHHNGRWEARIRRVLGNKYLYLGTCTQEEAARAYDKAAIEYRGIHAVTNFDLSHYITWLKPSHQNSQDPKPETEVVLNSQTLTSPSNYAPNPIQHSKPLPFDNTSYISLDHLNYPEKSRSL* 170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy4g2479 169 CDD AP2 41 101 IPR001471 GO:0003700|GO:0006355
Ahy4g2479 169 SUPERFAMILY DNA-binding domain 41 101 IPR016177 GO:0003677
Ahy4g2479 169 ProSiteProfiles AP2/ERF domain profile. 42 99 IPR001471 GO:0003700|GO:0006355
Ahy4g2479 169 Gene3D AP2/ERF domain 42 101 IPR036955 GO:0003700|GO:0006355
Ahy4g2479 169 Pfam AP2 domain 42 91 IPR001471 GO:0003700|GO:0006355
Ahy4g2479 169 PANTHER AP2 DOMAIN-CONTAINING TRANSCRIPTION FACTOR 22 141 - -
Ahy4g2479 169 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 22 141 - -
Ahy4g2479 169 SMART rav1_2 42 105 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy4g2479 Ahy-Chr4 122319340 122321211 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy4g2479 26 119 AP2-EREBP Transcription Factor Family AT1G79700 69.474 4.10e-32 113
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Ahy4g2479 AP2 1.10E-08 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy4g2479 - K09285 ahf:112795362 357.836