Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy4g2469 ATGGCAATGGCAATGGAGAATGATGAAGTGAGATTGAGAAAAAGAAGAAGAAGAGTGTGTGAAGAAGAAGGTGAGCTCCAAGAAGCAAGGTATATCAAGAAGAAGAAGCAGCCGCGGCCGCAGCAGCACGAAAATTCTAATGTGATCACTACTAAGAGAAGTTCAAAATTTCGTGGGGTTAGCAGACATAGATGGACGGGTAGGTTTGAGGCTCATTTATGGGACAAGCTTTCTTGGAATGTAACTCAAAAAAAGAAAGGGAAGCAAGTTTATCTTGGTGCTTATGATGAAGAAGAATCTGCTGCCAGAGCATATGATTTAGCAGCACTTAAGTATTGGGGAACATCAACTTTTACTAATTTTCCGTTATTAGATTATGAGAAAGAGCTAGAAATAATGCAGACTATGACCAAAGAAGAGTACTTGGCAACTTTAAGGAGGAAGAGTAGTGGCTTCTCAAGAGGTGTATCAAAGTATAGGGGTGTTGCAAGGCATCATCAGAATGGAAGATGGGAAGCAAGGATAGGAAGAGTTTTTGGGAACAAATATCTTTACCTTGGAACCTACAGCACACAAGAGGAAGCAGCACGAGCATATGACATAGCAGCAATTGAGTACAGAGGAATTAATGCTGTCACCAACTTTGATTTAAGTAATTACATTACATGGTTGAAGCCTTCACACCAAAACTCCCAAGACCCAAAACCTGAAACAGAAGTAGTACTAAACTCTCAAACACTCACTTCTCCATCCAACTATGCTCCAAATACAATACAACATTCAAAACCATTGCCCTTTGACAATACCTCTTTCATCAGTCTTGATCACCTGAATTATCCTGAAAATCAAGAAGTCTTTGATAACAAAATGTATCGATTTTCGAGCAGCAAGTCGTCTTCTCCCACGGCTCTTGGCCTTCTCTTTCGCTCTTCGCTGTTTAGGGAATTGGTTGAAAAGAACTCAAACAATGCATGTGGAGATGAACTTGATGAGGAAGTCACAAAAGATCAACAACAAAACGTAGCCAGTGATGATGAACTGGGTGGGATCTTCTGTGATGGCAGTGACAGCATTCCATTTTTCTATGATCCAAACACAAGTGGCTTAGAACTGCAAGAAAGCGATCTCTACTCAATTCTTTGA 1143 0.4042 MAMAMENDEVRLRKRRRRVCEEEGELQEARYIKKKKQPRPQQHENSNVITTKRSSKFRGVSRHRWTGRFEAHLWDKLSWNVTQKKKGKQVYLGAYDEEESAARAYDLAALKYWGTSTFTNFPLLDYEKELEIMQTMTKEEYLATLRRKSSGFSRGVSKYRGVARHHQNGRWEARIGRVFGNKYLYLGTYSTQEEAARAYDIAAIEYRGINAVTNFDLSNYITWLKPSHQNSQDPKPETEVVLNSQTLTSPSNYAPNTIQHSKPLPFDNTSFISLDHLNYPENQEVFDNKMYRFSSSKSSSPTALGLLFRSSLFRELVEKNSNNACGDELDEEVTKDQQQNVASDDELGGIFCDGSDSIPFFYDPNTSGLELQESDLYSIL* 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy4g2469 380 ProSiteProfiles AP2/ERF domain profile. 56 122 IPR001471 GO:0003700|GO:0006355
Ahy4g2469 380 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 10 367 - -
Ahy4g2469 380 Pfam AP2 domain 157 208 IPR001471 GO:0003700|GO:0006355
Ahy4g2469 380 Pfam AP2 domain 55 114 IPR001471 GO:0003700|GO:0006355
Ahy4g2469 380 SUPERFAMILY DNA-binding domain 157 218 IPR016177 GO:0003677
Ahy4g2469 380 ProSiteProfiles AP2/ERF domain profile. 158 216 IPR001471 GO:0003700|GO:0006355
Ahy4g2469 380 Gene3D AP2/ERF domain 55 123 IPR036955 GO:0003700|GO:0006355
Ahy4g2469 380 Gene3D AP2/ERF domain 157 218 IPR036955 GO:0003700|GO:0006355
Ahy4g2469 380 PANTHER BINDING PROTEIN, PUTATIVE-RELATED 10 367 - -
Ahy4g2469 380 MobiDBLite consensus disorder prediction 30 55 - -
Ahy4g2469 380 PRINTS Ethylene responsive element binding protein signature 57 68 IPR001471 GO:0003700|GO:0006355
Ahy4g2469 380 PRINTS Ethylene responsive element binding protein signature 198 218 IPR001471 GO:0003700|GO:0006355
Ahy4g2469 380 SMART rav1_2 158 222 IPR001471 GO:0003700|GO:0006355
Ahy4g2469 380 SMART rav1_2 56 128 IPR001471 GO:0003700|GO:0006355
Ahy4g2469 380 CDD AP2 157 218 IPR001471 GO:0003700|GO:0006355
Ahy4g2469 380 CDD AP2 55 122 IPR001471 GO:0003700|GO:0006355
Ahy4g2469 380 SUPERFAMILY DNA-binding domain 55 123 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy4g2469 Ahy-Chr4 122118970 122121515 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy4g2469 35 220 AP2-EREBP Transcription Factor Family AT5G57390 64.767 1.25e-85 265
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-AP2 Ahy4g2469 AP2 5.90E-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy4g2469 - - gmx:100792612 502.671
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy14g2812 14 136511359 136514208 Ahy4g2469 4 122118970 122121515 hybridization