Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy4g2461 ATGTGTTTTGGAACCATTGAAGATGCAAATCAATTTTATCAGAATTATGCCAAGCGCGTTGGTTTTGTTACTAAGATAAGGTTTACCCGAAGAGTTGGTAAAGATAAGGTTCCTAAGAATCAAATGATCAATTGCAATAGGGAGGGGAAATGCAAGTCTAGAGTTTCACCAATAGAAAAGACCAACCCTATAACCAACTACAATTGCCCCGCAAGGATTTCTATTAGGTTGAATAAGGAGGGTCTTTGGATTATATCGAAGGTGTGCTTGGATCATTCACATCCTTGTGATCCAGAGATGGCAAAACTGTTGACACGTAATAGAGAGATGACTATGCACATGTGTCGAGTCATTGAGAGGAATGATGAAGCAGGTGTGAGACCAAGCAAAAGATATCAAGTATTGGTGGGTGAAGCAGGGGGTTTTTCCAAGATAAACTTAATGGAAAAAGATGTTAGGAACTATCTCAGCAGAAAGGTACGCAATGTTACGGAAGAAATGGATGCTAGGGAGATGTTGAAGTATTTTACACGGATGAAGGAAATGAACTCTGATTTTTATTTTGATATTGAACTTGATCAAAACAAGCGTCTCAAAACTATATTTTGGGCTGATGCTCGAAGTAGAGCAGCATATGAGTACTTCGGTGATATAGTTTCGTTTGATACTACTTATAAAACCAATCGTTACGATATGTCATTTGGTTCCTTTGTGGGGGTTAATCACCATGGTAACTCAGTGCTTCTTGGGTGTGATATCTATGAAGAAAGACATCGATGGGTTCCAATTTTTCTTGACAACTTTTTTTGGGCTGGTATGAGATCCACACAACGAAGTGAGAGCATGCATTCATATTTTGACAAATTTATAAATAACAAGAGCTTGTTGATTCAATTTGTCAAACAATATGACAATTGCCTTGGATGGAAAGAGCAACAAGAAAGGGAGGCTGATGTTGAAGACTATAAATCAATAATACCTTGTGCCACTAATTCCTTAATAGAGAAGCAATTTCAAGGTGCCTATACTAATGCAAAGTTTAAGGAAGTACAAAAGCAATTTAGAAAGAAAGCAAGTTGTATTTTGCACCTTATGAAAGCAGTTTCTACATCTAAAGTCTATTCTATTTTGGAGGATGTATCTACTTCTAAAGAGAGGGTTTATGAAGTTAACTACAATGCGGAAACGAAGGATATTACATGCATGTGTCAAATGTTTGAATCAAGAGGCATATTATGCCATCATAGCTTGGTTGTCCTAGGGCATGAACGCGTGAGAAAAATTCCAAGAAGATACATTATGGACCGTTGGAGCAAACTTGTGAAGCGAAGACATAGTGATATTAAGAGCAGCCATGATTCAAGTTTGTTGAATCCAAAAACAGAGAGGTTTGATGATTTATGCTCCCATTCGAACAGTGTTGCTCAATTTGCATCCCAAACAAAGGAAACAAGTGATATCTTACATCGTTATCTTGATATGGCTATGGCAGAGTGTCAAAAGCATGTTGCTAACTCATCATCTAATGCCAATGAGTTAGATATTTTGTTTGAGGTATAA 1560 0.3724 MCFGTIEDANQFYQNYAKRVGFVTKIRFTRRVGKDKVPKNQMINCNREGKCKSRVSPIEKTNPITNYNCPARISIRLNKEGLWIISKVCLDHSHPCDPEMAKLLTRNREMTMHMCRVIERNDEAGVRPSKRYQVLVGEAGGFSKINLMEKDVRNYLSRKVRNVTEEMDAREMLKYFTRMKEMNSDFYFDIELDQNKRLKTIFWADARSRAAYEYFGDIVSFDTTYKTNRYDMSFGSFVGVNHHGNSVLLGCDIYEERHRWVPIFLDNFFWAGMRSTQRSESMHSYFDKFINNKSLLIQFVKQYDNCLGWKEQQEREADVEDYKSIIPCATNSLIEKQFQGAYTNAKFKEVQKQFRKKASCILHLMKAVSTSKVYSILEDVSTSKERVYEVNYNAETKDITCMCQMFESRGILCHHSLVVLGHERVRKIPRRYIMDRWSKLVKRRHSDIKSSHDSSLLNPKTERFDDLCSHSNSVAQFASQTKETSDILHRYLDMAMAECQKHVANSSSNANELDILFEV* 520
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy4g2461 519 PANTHER OS03G0843700 PROTEIN 253 504 - -
Ahy4g2461 519 PANTHER OS03G0843700 PROTEIN 1 251 - -
Ahy4g2461 519 Pfam FAR1 DNA-binding domain 11 97 IPR004330 -
Ahy4g2461 519 ProSiteProfiles Zinc finger SWIM-type profile. 388 424 IPR007527 GO:0008270
Ahy4g2461 519 Pfam SWIM zinc finger 388 421 IPR007527 GO:0008270
Ahy4g2461 519 SMART 26again6 399 426 IPR006564 GO:0008270
Ahy4g2461 519 Pfam MULE transposase domain 218 256 IPR018289 -
Ahy4g2461 519 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 253 504 IPR031052 GO:0006355
Ahy4g2461 519 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 1 251 IPR031052 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy4g2461 Ahy-Chr4 122035395 122037548 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Ahy4g2461 FAR1 7.80E-16 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy4g2461 - - adu:107485253 830.091