Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy4g2434 ATGAGTCGAAGAGTGAGGAGGAAGGTGGCAAGGAAAAGCAAAGGGAATGATGTTGTAGCTTCAAGTTGTCCTGAGATTCGCGATGAGGTTTTGGATTTGGAACTGCCAGGGACGGTTGATTGGAGGAGCTTACCTGATGATACAGTGATTCAGCTGTTGTCATGTCTGAGTTATAGGGACCGAGCTAGCTTATCGTCGACTTGTAGGACATGGAGGACTCTTGGCAGCTCGCAGTGTTTGTGGAACACGTTGGATCTTCGTTCCCACAGGTTTGATGCTAATATGGCATCTTCACTTGCTCCGAGGTGTGTGCATCTTCAGAAGCTAAGGTTTCGTGGGGCAGAGTCTGCTGATGCCATAATCCATCTTCGAGCTAGGAACTTGTGTGAGTTAAGTGGTGACTATTGCAGGAAAATTACTGATGCAACTCTTTCGGTGATTGCTGCCCGGCATGAGTTACTTGAGAGTCTTCAGCTTGGACCTGATTTCTGTGAGAGAATAAGTAGTGATGCTATTAAGGCAATAGCTCATTGCTGTCCTAGACTTAGTAAACTTAGGCTTTCAGGTATCAGAGATGTAAATGCAGATGCTATCAATGCACTGGCTAAGCATTGTCCAAAGTTGACTGATATTGGGTTCATTGATTGTTTGAATGTTGATGAGCTTGCATTGGGGAATGTGATGTCGGTTCATTTCCTTTCTGTTGCGGGCACATCAAGTATGAAGTGGGGTGTTGTTTCCCATCTTTGGCATAAGCTTCCTAACCTGATTGGATTAGATGTTTCGAGAACTGATATTAGTCCATCTGCCGTTGCAAGGTTGTTATCCTTATCACAGAGTTTGAGGGTTTTGTGTGCTTTGAATTGTCCAATCCTCGAAGAAGACACTAGCTTCTCCGCTAGTAAATATAAAAACAAGTTATTAATTTCCCTTTTTACCAATATTTTTGAAGGACTAGCTTCCTTATTTTTTGATAGTACGAAGAAAGGAAAGAATGTCTTTTTGGACTGGAGGAGTTCGAAGAATAATGATAAGGACCTTAATGAAATTATACCTTGGCTTGAATGGATGCTGTCCCATACACTACTTAGATCTGCTGAGAGCCCTCAACAGGGTCTTGACAATTTCTGGGTTGAACAAGGCGGAGCACTCTTACTTAGTCTAATGCAGAGTTCTCAAGAGGATGTTCAAGAGAGGGCAGCTACGGGCCTTGCAACTTTTGTCGTGATTGATGATGAAAATGCTAGCATAGATTGTGGAAGGGCTGAAGCAGTTATGCGAGATGGTGGCATAAGGCTCCTTCTTGGCTTAGCAAAATCTTGGAGGGAAGGGCTTCAATCTGAGGCAGCTAAGGCAATTGCAAATTTGTCTGTCAATGCCAATGTGGCCAAAGCTGTTGCTGAAGAGGGTGGGATTGAGATTCTCGCTGGTTTGGCTAGGTCAATGAACAAGCTGGTGGCTGAAGAGGCTGCTGGAGGGTTGTGGAATCTCTCTGTGGGAGAAGAGCACAAGGGTGCCATTGCGGAAGCGGGTGGAATAAAAGCTTTAGTGGATCTTATATTCAAATGGTCCTCTAGTGGAGATGGAGTTTTGGAACGTGCAGCTGGTGCATTGGCTAATTTGGCGGCTGACGATAAGTGTAGTACAGAGGTTGCATTGGCAGGTGGTGTGCATGCTTTAGTGATGCTTGCTCGTAACTGCAAATTTGAGGGCGTGCAAGAGCAGGCTGCTCGTGCATTGGCTAATTTAGCTGCTCATGGAGATAGCAATAGTAACAATGCTGCTGTTGGACAAGAAGCAGGTGCTCTTGAGGCACTTGTTCAACTTACACGATCTCCACATGAGGGCGTCAGGCAAGAAGCTGCTGGTGCCCTTTGGAATTTGTCATTTGATGATAGAAACAGGGAAGCCATCGCAGCAGCTGGTGGAGTTCAGGCTTTGGTTGCTCTTGCGCAATCTTGTTCTAATGCCTCTCCTGGACTTCAAGAAAGGGCCGCCGGTGCTCTCTGGGGATTATCAGTTTCCGAGGCCAATAGCATTGCCATTGGACGTGAAGGAGGTGTTGCACCTTTGATTGCTCTTGCAAGGTCTGAAGCAGAGGATGTTCATGAAACTGCCGCAGGAGCACTGTGGAATCTTGCTTTCAACCCTGGTAATGCTTTACGAATAGTAGAGGAAGGAGGAGTTTCTGCACTTGTGGATCTGTGTTCTTCATCAGTTTCGAAGATGGCACGGTTCATGGCTGCCTTGGCATTGGCTTACATGTTCGATGGCAGAATGGATGAGTTTGCTTTAGTAGGCACGGGTTCGGAAGGTATTTCTAAGAGCGTGAGCTTGGATGGGGCAAGAAGGATGGCCTTAAAAAACATTGAAACCTTTGTCCTTATGTTTTCGGATCCACAAGCATTCACAGCTGCTGCAGCATCATCGGCTCCCGCAGCATTATCCCAGGTTACTGAAGGCGCCCGAATACAGGAAGCAGGACATCTGAGATGCAGTGGTGCTGAAATCGGAAGATTTGTCACCATGCTGCGGAATCCATCATCTATACTCAAGACTTGTGCAGCATTTGCTCTTCTCCAGTTTACAATTCCTGGGGGAAGACACGCTGTTCACCATGCCAGCCTCATGCAGAATGCAGGAGCAGCAAGAGTTCTTCGTGGCGCGGCTGCTGCTGCCACAGCTCCACTCGAAGCGAAAATCTTTGCCAGAATAGTTCTTCGCAACTTTGAGTATCACCAAATTGAGCATACAGCGTAG 2760 0.4641 MSRRVRRKVARKSKGNDVVASSCPEIRDEVLDLELPGTVDWRSLPDDTVIQLLSCLSYRDRASLSSTCRTWRTLGSSQCLWNTLDLRSHRFDANMASSLAPRCVHLQKLRFRGAESADAIIHLRARNLCELSGDYCRKITDATLSVIAARHELLESLQLGPDFCERISSDAIKAIAHCCPRLSKLRLSGIRDVNADAINALAKHCPKLTDIGFIDCLNVDELALGNVMSVHFLSVAGTSSMKWGVVSHLWHKLPNLIGLDVSRTDISPSAVARLLSLSQSLRVLCALNCPILEEDTSFSASKYKNKLLISLFTNIFEGLASLFFDSTKKGKNVFLDWRSSKNNDKDLNEIIPWLEWMLSHTLLRSAESPQQGLDNFWVEQGGALLLSLMQSSQEDVQERAATGLATFVVIDDENASIDCGRAEAVMRDGGIRLLLGLAKSWREGLQSEAAKAIANLSVNANVAKAVAEEGGIEILAGLARSMNKLVAEEAAGGLWNLSVGEEHKGAIAEAGGIKALVDLIFKWSSSGDGVLERAAGALANLAADDKCSTEVALAGGVHALVMLARNCKFEGVQEQAARALANLAAHGDSNSNNAAVGQEAGALEALVQLTRSPHEGVRQEAAGALWNLSFDDRNREAIAAAGGVQALVALAQSCSNASPGLQERAAGALWGLSVSEANSIAIGREGGVAPLIALARSEAEDVHETAAGALWNLAFNPGNALRIVEEGGVSALVDLCSSSVSKMARFMAALALAYMFDGRMDEFALVGTGSEGISKSVSLDGARRMALKNIETFVLMFSDPQAFTAAAASSAPAALSQVTEGARIQEAGHLRCSGAEIGRFVTMLRNPSSILKTCAAFALLQFTIPGGRHAVHHASLMQNAGAARVLRGAAAAATAPLEAKIFARIVLRNFEYHQIEHTA* 920
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy4g2434 919 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 470 512 IPR000225 GO:0005515
Ahy4g2434 919 SMART fbox_2 44 84 IPR001810 GO:0005515
Ahy4g2434 919 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 642 687 IPR000225 GO:0005515
Ahy4g2434 919 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 601 643 IPR000225 GO:0005515
Ahy4g2434 919 SMART arm_5 631 674 IPR000225 GO:0005515
Ahy4g2434 919 SMART arm_5 459 499 IPR000225 GO:0005515
Ahy4g2434 919 SMART arm_5 675 715 IPR000225 GO:0005515
Ahy4g2434 919 SMART arm_5 716 757 IPR000225 GO:0005515
Ahy4g2434 919 SMART arm_5 418 458 IPR000225 GO:0005515
Ahy4g2434 919 SMART arm_5 590 630 IPR000225 GO:0005515
Ahy4g2434 919 SMART arm_5 500 543 IPR000225 GO:0005515
Ahy4g2434 919 SMART arm_5 544 585 IPR000225 GO:0005515
Ahy4g2434 919 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 555 586 IPR000225 GO:0005515
Ahy4g2434 919 SUPERFAMILY ARM repeat 362 745 IPR016024 -
Ahy4g2434 919 PANTHER PROTEIN ARABIDILLO 1 1 905 IPR044583 -
Ahy4g2434 919 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 511 556 IPR000225 GO:0005515
Ahy4g2434 919 Gene3D - 383 504 IPR011989 -
Ahy4g2434 919 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 429 471 IPR000225 GO:0005515
Ahy4g2434 919 Pfam F-box-like 41 87 IPR001810 GO:0005515
Ahy4g2434 919 Gene3D Ribonuclease Inhibitor 35 329 IPR032675 -
Ahy4g2434 919 Pfam Armadillo/beta-catenin-like repeat 501 543 IPR000225 GO:0005515
Ahy4g2434 919 Pfam Armadillo/beta-catenin-like repeat 631 673 IPR000225 GO:0005515
Ahy4g2434 919 Pfam Armadillo/beta-catenin-like repeat 593 629 IPR000225 GO:0005515
Ahy4g2434 919 Pfam Armadillo/beta-catenin-like repeat 677 714 IPR000225 GO:0005515
Ahy4g2434 919 Pfam Armadillo/beta-catenin-like repeat 423 457 IPR000225 GO:0005515
Ahy4g2434 919 Pfam Armadillo/beta-catenin-like repeat 554 585 IPR000225 GO:0005515
Ahy4g2434 919 Pfam Armadillo/beta-catenin-like repeat 464 498 IPR000225 GO:0005515
Ahy4g2434 919 SUPERFAMILY RNI-like 63 294 - -
Ahy4g2434 919 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 686 728 IPR000225 GO:0005515
Ahy4g2434 919 Gene3D - 681 897 IPR011989 -
Ahy4g2434 919 Gene3D - 592 680 IPR011989 -
Ahy4g2434 919 Gene3D - 505 591 IPR011989 -
Ahy4g2434 919 ProSiteProfiles F-box domain profile. 38 84 IPR001810 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy4g2434 Ahy-Chr4 121666035 121675662 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy4g2434 572 759 U-box Gene Family AT2G23140 35.979 4.67e-20 93.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy4g2434 - - ccaj:109792060 1566.21
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy14g2774 14 135994185 136003732 Ahy4g2434 4 121666035 121675662 hybridization