Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy4g2411 ATGGGAATTGCTGGATATCCTCTAGCTACTTCTACCATTTTTCCTATCCAAAAGCCAACTGATGTCGAACGTGACGAGTCTCCTATCAATGTCCTTACTTCTGAAGTCGAAGATCTAAACTTTGATGACTTCGACTTCAACTTTGCCAACATCCTTTTGGAAGCTCGACAGCATTTTCCATTCAGATACGAGGAGTTGGCAGTTGCAACAGATGGGTTCTCGAAAGCAAATTTACTTGGAGAAGGTGGATTCGGTTATGTCCACAAAGGACTCCTTCCAAACGGCAAAGAGGCTGCCATCAAACAGCTCAAGGATGGAAGTAGGCAGGGAGAGCGTGAATTCCAAGCTGAAGTAGACATAATCACTCGGCTTCATCACAGGAATCTCGTTTCTTTGCTTGGATATTGCATCGCCGACCACCATAGACTTCTCGTCTATGAATTTGTTCCAAACAATACATTAGAGTTCCATCTACATGGGCAAGGTCCTACTATAGATTGGCCTACAAGAATGAGGATTGCTCTAGGAGCTGCTAAGGGAATAGCATATCTTCATGAGGAATGTTATCCCAAGATCATCCATCGTGATATCAAAGCTGCTAACATTCTCCTCGATTTTAATTTCCAAGCGAAGGTTGCTGATTTTGGGCTTGCAAAGTTTTGCCCGGATATGAATACGCATGTTTCCACTCGAGTGATGGGAACTCTAGGGTATGTAGCTCCTGAATATGCTTCCAGTGGAAACCTCACCGAAAAGGCCAACGTTTTCTCCTTCGAAGTCATGCTTCTTGAGTTAATTACTGGCCGCCGACCAGTAATTGATTCACATCATACTTTCATGGAGGTTAGTTTGGCAATGCCTTTACTAACAAAGGTTTTGAAAGACAATAATTTTGAAGTTGTAGCTGACCGAAAGCTCCAAAATCAGTATGAACCAACCGAAATGGTTTCCATGCTGGCCTCTGCAGCTGCTTCTATACGATATGAAGCAAAGCTTCGACCAAAAATGAGCCAGATAGTTCGTGCTTTGGAAGGAGATGCATCTCAAGTAGCTGAGTTCACTTCTAATGTATTATGCTTAGAGTCTGAGGCTGCTACATACAGACGAGAAATGATTAAAATCATTTTCGACATGAGTGGATCCACGAGTTAA 1152 0.428 MGIAGYPLATSTIFPIQKPTDVERDESPINVLTSEVEDLNFDDFDFNFANILLEARQHFPFRYEELAVATDGFSKANLLGEGGFGYVHKGLLPNGKEAAIKQLKDGSRQGEREFQAEVDIITRLHHRNLVSLLGYCIADHHRLLVYEFVPNNTLEFHLHGQGPTIDWPTRMRIALGAAKGIAYLHEECYPKIIHRDIKAANILLDFNFQAKVADFGLAKFCPDMNTHVSTRVMGTLGYVAPEYASSGNLTEKANVFSFEVMLLELITGRRPVIDSHHTFMEVSLAMPLLTKVLKDNNFEVVADRKLQNQYEPTEMVSMLASAAASIRYEAKLRPKMSQIVRALEGDASQVAEFTSNVLCLESEAATYRREMIKIIFDMSGSTS* 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy4g2411 383 SMART serkin_6 73 343 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy4g2411 383 ProSitePatterns Protein kinases ATP-binding region signature. 79 101 IPR017441 GO:0005524
Ahy4g2411 383 Gene3D Phosphorylase Kinase; domain 1 43 148 - -
Ahy4g2411 383 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 54 348 - -
Ahy4g2411 383 ProSiteProfiles Protein kinase domain profile. 73 354 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy4g2411 383 SUPERFAMILY Protein kinase-like (PK-like) 53 343 IPR011009 -
Ahy4g2411 383 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 54 348 - -
Ahy4g2411 383 Pfam Protein kinase domain 74 319 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy4g2411 383 CDD STKc_IRAK 79 345 - -
Ahy4g2411 383 ProSitePatterns Serine/Threonine protein kinases active-site signature. 192 204 IPR008271 GO:0004672|GO:0006468
Ahy4g2411 383 Gene3D Transferase(Phosphotransferase) domain 1 149 357 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy4g2411 Ahy-Chr4 121321312 121335062 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy4g2411 43 374 Trihelix Transcription Factor Family AT5G38560 53.412 5.42e-122 366
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-1 Ahy4g2411 Pkinase 7.90E-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy4g2411 - - ahf:112743291 607.831