Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy4g2410 ATGGAATTCAGATTCAAACCACCAAGTCCTATTCGCTGTGCACGATACCGTCAATTATTTCCCCAAGGTACCAACCACTGTCTACTAGTAGGATGTGATTGTCCTTCTCCTTCAATTTTTATTTCATTTCCTCCTCGGCGGCGTCGGCGGTCTTTGTTGTCACCACCACCGTTACCTCCTCCTCCACCATTGTTGCCGCTACCACCACCACTAGCTCTTTCCTCACCAACACCATCATTGCCACCGCCACCACCACTAGCTCTTTGCCCACCACCGCTACGACTTTTCTCTCCTGCCCCTCCGCTTCCTCAAACTCCCCTGCCGGCGAAACCTTCCTCTAAACCAACCCAGGCACTGTGTTTCCCTCCCCCAAGTTCGACTCCAGCACCATCTTTTTCGTCAAGTAGCCTCATCGTTGGAATGGCGGCAGCAGTCACTTTTGCCATTTTGATTGTGGTGCTCACCGCTTTTGGCATTTTTTATTGGAGGAATAGGAAGAGAGAACATGATAAGGGGCTCAGATTTAAAGGCAATAACGGAATAATAGAAATGTCATCAAAGAACAGAATATTCAGATACGAGGAGTTGGCAGTTGCAACAGATGGATTCTCCAAAGCAAATTTGGTTGGAGAAGGTGGATTCGGTTATGTCCACAAAGGAGTTCTTCCAAACGGCATGAAGGCTGCCATCAAACAGCTCAAGGATGGAAGTAGGCAGGGAGAGCGTGAATTCCAAGCTGAAGTAGACATAATCACTCGGCTTCATCACAGGAATCTCGTTTCTTTACTTGGATATTGCATCGCTGGCCACCATAGACTTCTCGTCTACGAATTTGTTCCAAACAATACATTAGAGTTCCATCTACATGGGAAAGGTCCTACTATATATTGGCCTACAAGAATGAGGATTGCTCTAGGAGCTGCTAAGGGATTAGCATATCTTCATGAGGAATGTTATCCCAAGATCATCCATCGTGATATCAAAGCTGCTAACATTCTCCTCGATTTTAATTTCCAAGCAAAGGTTGCTGATTTTGGGCTTGCAAAGTTTTGCCCGGATATGAATACGCATGTTTCCACTCGAGTCATGGGAACTCTAGGGTATGTAGCTCCTGAATATGCTTCCAGTGGAAACCTCACTGAAAAAGCCGACGTTTTCTCCTTTGGAGTCATGCTTCTCGAGTTAATTACTGGTCGCCGACCAGTAATTGATTCACGTCATACTTTCATGGAGGCAATGCCTTTGCTAATAAAGGTTTTGAAAGAGAATAATTTTGAAGTTGTAGCTGACCAAAAGCTCCAAAATCAGTATGAAGCAACCGAAATGGTTTCCATGCTGGCCTCTGCAGCTGCTTCTATACGATATGAAGCAAAGCTTCGACCAAAGATGAGCCAGATAGTTCGTGCTTTGGAAGGAGATGCATCTCAAGTAGCTGAGTTCACTTCTAATGTATTACGCTTAGATTCTGAGGCTGCTACATACAGACGAGAAATGATCAAAATCATTAGTGACATGAGTGGATCCACGAGTTAA 1533 0.4501 MEFRFKPPSPIRCARYRQLFPQGTNHCLLVGCDCPSPSIFISFPPRRRRRSLLSPPPLPPPPPLLPLPPPLALSSPTPSLPPPPPLALCPPPLRLFSPAPPLPQTPLPAKPSSKPTQALCFPPPSSTPAPSFSSSSLIVGMAAAVTFAILIVVLTAFGIFYWRNRKREHDKGLRFKGNNGIIEMSSKNRIFRYEELAVATDGFSKANLVGEGGFGYVHKGVLPNGMKAAIKQLKDGSRQGEREFQAEVDIITRLHHRNLVSLLGYCIAGHHRLLVYEFVPNNTLEFHLHGKGPTIYWPTRMRIALGAAKGLAYLHEECYPKIIHRDIKAANILLDFNFQAKVADFGLAKFCPDMNTHVSTRVMGTLGYVAPEYASSGNLTEKADVFSFGVMLLELITGRRPVIDSRHTFMEAMPLLIKVLKENNFEVVADQKLQNQYEATEMVSMLASAAASIRYEAKLRPKMSQIVRALEGDASQVAEFTSNVLRLDSEAATYRREMIKIISDMSGSTS* 511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy4g2410 510 Gene3D Transferase(Phosphotransferase) domain 1 279 490 - -
Ahy4g2410 510 CDD STKc_IRAK 209 472 - -
Ahy4g2410 510 Pfam Protein tyrosine and serine/threonine kinase 207 470 IPR001245 GO:0004672|GO:0006468
Ahy4g2410 510 SUPERFAMILY Protein kinase-like (PK-like) 180 470 IPR011009 -
Ahy4g2410 510 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 184 480 - -
Ahy4g2410 510 ProSitePatterns Protein kinases ATP-binding region signature. 209 231 IPR017441 GO:0005524
Ahy4g2410 510 ProSitePatterns Serine/Threonine protein kinases active-site signature. 322 334 IPR008271 GO:0004672|GO:0006468
Ahy4g2410 510 MobiDBLite consensus disorder prediction 100 124 - -
Ahy4g2410 510 SMART serkin_6 203 470 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy4g2410 510 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 184 480 - -
Ahy4g2410 510 Gene3D Phosphorylase Kinase; domain 1 166 278 - -
Ahy4g2410 510 ProSiteProfiles Protein kinase domain profile. 203 481 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy4g2410 510 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 32 - -
Ahy4g2410 510 MobiDBLite consensus disorder prediction 51 70 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy4g2410 Ahy-Chr4 121311418 121317729 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy4g2410 172 490 Trihelix Transcription Factor Family AT4G32710 58.308 9.89e-123 374
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-1 Ahy4g2410 PK_Tyr_Ser-Thr 4.40E-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy4g2410 - - ahf:112743291 743.421