Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy4g2407 ATGGAATCCAAATTGGGACCACGAAATCCTATTCTTTGTGCTCAATACCGTCAATTATTTCACCAAGGTACCAACCTCTGTCTAGCTGTAGGATGTGACTGTCCTCCTCCTTCTCTACTTTCTCACTTTTCATTGTCACCACCACCGTTACCTCCTCCGCCATTGTTGCTGCCACCGCCACCGCCACCGCCACCCCCACTAGTTATTTCCCCACCAATGCTGCCACTGCCACCGCCACCGCCACCACCACTAGCTCTTTCCTTACCAATGCCACCACCGCCACGACTTTTCTCTCCTGCCCCTCCACCTCCTCAAACTCCCCTGCCGATGAAACCTTCCTCTAAACCAACTCAGGTACTGCATTTCCCTCCTCCAAGTTCGACTCCAGCACCATCTTTTTCGTCAAGTGGCGTCATCGTTGGAATGGCGGCAATCGTCACTTTCGCCATTTTGATTGTGGTGCTTAGCGCTTTTGGTATTTCTTATTGGAAGAATAGGAAGAGAAAACATGATAAAGATCTTGGATTTAAAGGGAATAACGGGATAATAGAAATGTCATCAAAGAACAGAATATTCAGATACGAGGAGTTGGAAGTTGCAACAGATGGGTTCTCGAAAGCAAATTTGGTTGGAGAAGGTGGATTCGGTTATGTCCACAAAGGAGTTCTTTCAAACGGCAAGGAGGCTGCCATCAAACAGCTCAAGGATGGAAGTAGGCAGGGAGAGCGTGAATTCCAAGCTGAAGTAGACATAATCACTCGGCTTCATCACAGGAATCTCGTTTCTTTACTTGGATATTGCATCGCTGGCCACCGTAGACTTCTCGTCTACGAATTTGTTCCAAACAATACATTAGAGTTCCATCTACATGGGCAAGGTCCTAGTGTAGATTGGCCTACAAGAATGAGGATTGCTCTAAGAGCTGCTAAGGGATTAGCATATCTTCATGAGGAATGTTATCCCAAGATCATCCATCGTGATATCAAAGCCGCTAACATTCTCCTCGATTTTAATTTCCAAGCGAAGGTTGCTGATTTTGGACTTGCAAAGTTATGCCAGGATATGAATACGCATGTTTCCACTCGAGTGATGGGAACTCTAGGGTATGTAGCTCCTGAATATGCTTCCAGTGGAAATCTCACTGAAAAAGCCGACGTTTTCTCCTTCGGAGTCATGCTTCTTGAGTTAATTACTGGCCGCCGACCAATAATTGATTCACATCATACTTTCGTAGAGGCAATGCCTTTGCTAACAAAGGTTTTGAAAGAGAATAATTTTAAAGTTGTAGCTGACCGAAAGCTCCAAAATCAGTATGAAGCAACCGAAATGGTTTCCATGCTGGCCTCTGCAGCTGCTTCTATACGATATGAAGCAAAGCTTCGACCAAAGATGAGCCAGATAGTTCGTGCTTTGGAAGGAGATGCATCTCAAGTAGCTGAGTTCACTTCTAATGTATTATGCTTAGATTCTGAGGCTGTTACGCACAGACAAGAAATGATTAAAATCATTAGTGACATGAGTGGATCCACGAGTTAA 1536 0.4486 MESKLGPRNPILCAQYRQLFHQGTNLCLAVGCDCPPPSLLSHFSLSPPPLPPPPLLLPPPPPPPPPLVISPPMLPLPPPPPPPLALSLPMPPPPRLFSPAPPPPQTPLPMKPSSKPTQVLHFPPPSSTPAPSFSSSGVIVGMAAIVTFAILIVVLSAFGISYWKNRKRKHDKDLGFKGNNGIIEMSSKNRIFRYEELEVATDGFSKANLVGEGGFGYVHKGVLSNGKEAAIKQLKDGSRQGEREFQAEVDIITRLHHRNLVSLLGYCIAGHRRLLVYEFVPNNTLEFHLHGQGPSVDWPTRMRIALRAAKGLAYLHEECYPKIIHRDIKAANILLDFNFQAKVADFGLAKLCQDMNTHVSTRVMGTLGYVAPEYASSGNLTEKADVFSFGVMLLELITGRRPIIDSHHTFVEAMPLLTKVLKENNFKVVADRKLQNQYEATEMVSMLASAAASIRYEAKLRPKMSQIVRALEGDASQVAEFTSNVLCLDSEAVTHRQEMIKIISDMSGSTS* 512
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy4g2407 511 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 185 476 - -
Ahy4g2407 511 Pfam Protein tyrosine and serine/threonine kinase 208 471 IPR001245 GO:0004672|GO:0006468
Ahy4g2407 511 ProSiteProfiles Protein kinase domain profile. 204 482 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy4g2407 511 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 185 476 - -
Ahy4g2407 511 ProSitePatterns Serine/Threonine protein kinases active-site signature. 323 335 IPR008271 GO:0004672|GO:0006468
Ahy4g2407 511 SUPERFAMILY Formin homology 2 domain (FH2 domain) 61 199 - -
Ahy4g2407 511 MobiDBLite consensus disorder prediction 85 111 - -
Ahy4g2407 511 SUPERFAMILY Protein kinase-like (PK-like) 181 471 IPR011009 -
Ahy4g2407 511 CDD STKc_IRAK 210 473 - -
Ahy4g2407 511 Gene3D Phosphorylase Kinase; domain 1 166 279 - -
Ahy4g2407 511 SMART serkin_6 204 471 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy4g2407 511 Gene3D Transferase(Phosphotransferase) domain 1 280 489 - -
Ahy4g2407 511 MobiDBLite consensus disorder prediction 85 127 - -
Ahy4g2407 511 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 32 - -
Ahy4g2407 511 ProSitePatterns Protein kinases ATP-binding region signature. 210 232 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy4g2407 Ahy-Chr4 121240638 121245224 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy4g2407 177 491 Trihelix Transcription Factor Family AT4G32710 59.633 1.28e-122 374
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-1 Ahy4g2407 PK_Tyr_Ser-Thr 3.70E-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy4g2407 - - ahf:112743291 742.265