Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy4g2400 ATGGAAGTGACAGAGAAATGTGATGTATATAGCTTTGGAGTGCTTTGTTTGGAGATTCTTATGGGAAAGCATCCTGGGGATCTGATAAGTTCATTGTTGTCACCATCAACAGCATTAATCAGTTGCAATTTGTTATTGGTTGAAGTCATAGATCAGAGACCTCCACATCCTGAAGAATTAATGGTTGGTGATATCATGAAGATCATAAAGTTGGCACTGAATTGCTTGAGCCACAATCCACAATCTCGACCAAGTATGCATCAAGTGTCCAAAGAGCTTATGATGGGAAAATTGCCTTTTGCTAATCACCAGTTTCCTATCATCAGAATTGGACAGCTCAATGAAGAATGGCAAACTCCACTTATATGA 369 0.3902 MEVTEKCDVYSFGVLCLEILMGKHPGDLISSLLSPSTALISCNLLLVEVIDQRPPHPEELMVGDIMKIIKLALNCLSHNPQSRPSMHQVSKELMMGKLPFANHQFPIIRIGQLNEEWQTPLI* 123
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy4g2400 122 Gene3D Transferase(Phosphotransferase) domain 1 1 101 - -
Ahy4g2400 122 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 1 113 - -
Ahy4g2400 122 SUPERFAMILY Protein kinase-like (PK-like) 3 99 IPR011009 -
Ahy4g2400 122 Pfam Protein tyrosine and serine/threonine kinase 2 93 IPR001245 GO:0004672|GO:0006468
Ahy4g2400 122 PANTHER LRR RECEPTOR-LIKE KINASE 1 113 - -
Ahy4g2400 122 ProSiteProfiles Protein kinase domain profile. 1 101 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy4g2400 Ahy-Chr4 121070794 121071301 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy4g2400 1 99 Receptor kinase-like Gene Family AT3G56370 33.333 8.65e-11 56.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Ahy4g2400 PK_Tyr_Ser-Thr 2.00E-07 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy4g2400 - - ahf:114927674 250.366