Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy4g2396 ATGCCACCCATGTCCCAACAACTTGTCTTCATATTCCTTTGTGTCCTTATTGTAAAACTCTCTTGGGTTGCAAGTGAAAAGAGTGAAGCAAATGCCCTCTTAAAGTGGAAGGCCAGCCTGGAGAACCAAAGCCAAGTTGCCTTATCATCTTGGAAGAACGGGACAAGTCCATGCAGATGGACAGGAATTCAATGTGATAGATCCAATTCCGTAACCGCCATCAATCTTGAAAATTATCTTCTCAAAGGTACACTCCACGCTCTAGACTTTTCCTCACTCCCCAACCTCCTCACCTTTAACATCTACAACAACTTCTTTCATGGAACCATTCCCCCACAAATTGGTAACATGTCCAAAATCAATCGTTTGAACTTCTCTTTGAATCCTTTTGATGGTTCCATCCCTCAAGAGATGTGGACACTGAGAAACATACGCTGGCTTGATCTTTCCTTCTGTAATTATCTAACAGGACCCATCCCTTCTTCCATTGCAAATTTGACAAACTTATCATATCTAGATTTAGGAGGCAACAATCTCTCCTGCTCCATTCCTCCTACAATTGGCAAACTGAACAACCTTGCCTTTTTTTCTATTGAGTCTAGTAAGATTGGAGGTTCCATTCCCCATGAAATCGGAATGTTGTCAAATCTAGAGTATCTTGATTTCATAGGAAACGATCTCACTGGCAATATCCCTTCTACAATTGCTAATATGAGCAAGTTAAATCAACTTTTACTATCTAACAACACCCTCTCTGGCCCAATCCCACCCTTCCTATGGAACATGTCTAACCTCACCTTGCTGTGGCTTGATTCCAATAACTTTTCTGGAAATATCCCTACCTCAATAGGAAACTTGGTCAATTTGGAGTCCCTTAATATGATGAAAAACCAACTTTCTGGATCCATTCCTTCCACAATTGGAAACATGACAAATCTTGTTGAGATATCTCTCGACTTCAACAATTTTGAAGGACACATTCCTGCCTCTGTTGGTAATTTGATCAACTTGGACACCTTAACTCTCCAAGGAAACTTTCTCTCAGGATCTATTCCTGACACAATTGGAAACTTGAACCGGCTCTCCATGTTACAATTGTCATCCAACATGCTCAGGGGCAACATTCCGCAAGCCGTTAATAACCTTACCAACATGAATGGCTTTCTTGTAGACAATAATTATCTCATTGGCCACTTGCCGCCTCAAATCTGCTTAGGTGGTTCACTAGCATCCTTCGTTGCTCAAAACAACCGTTTCACTGGTCCAGTACCAAGCAGCTTGAAGAACTGCTCTAGTATTGTCTACATAACTTTACAGAATAACCATTTGGAAGGAGACATATCCCAAGACTTTGGTGTTTATCCAAATTTGAATTACATTGATCTAAGTAACAACAAATTTCATGGCCAAATTTCATCAAACTGGGGCAAGTGCAATAGTCTTCAAGTCTTGATCATTGCCAAAAATAATATTTCCGGTGGTATATCGCCACAAATTGCTGAGGCTACCAAGCTGGGCAGGCTTCATCTTTTTTCAAACCAATTGAGCGGAAATATTCCAAAAGAACTGGGGAATATGACAAACTTGTTTGAACTCAGGATCGACAACAATCATCTTTCTGGAAATATTCCACCCGAAATAGGATTGTTGCAAGGTCTCAGTCACTTGAACCTAGCAGGAAATGAGTTGAGTGGCAACATACCGAGACAAGTTGTTCAGTTATCTAACTTGTTGGAATTGAACTTGAGCAACAACAAATTAGAAGGAAGTATCCCCTCTGACTCCAAGTCATTGGAAACTCTCAATTCTCTTGATCTTAGTGGGAATTTCTTGAATGGTACAATACCAAGAGTGCTTGGAGAATTGAAGAACTTGCAGTGGTTGAATCTCTCTCGCAACAATCTTTCTGGCACAATTCCATCTAGTTTTAATGGCATGTCAAGCTTAGCTTTTGTCAACATATCATACAACCAGTTAGATGGGCCTCTTCCAAATAACAGAGCCTTTCTTCATGCTTCAATTGAATCATTGAAAAATAACAAAGCCTTGTGTGGTAATGTCACTGGCTTGGTGCCATGCCCAAGCAGTCCTAGCGGTAAAAGTCACAAGGTCAAGTCATTGGTTCTGCTTCTTATCTTTGGAGTATTAGCACTAGCACTTTGTGTGATTGGTGTTTCAGTATATATTCTTTGTAGAAAAGCAAGAAAGAAAGAAGCCCCCGCCAGAGAAATGCAACCAGAAGAACAATTTTCCATATGGAGTCATGATGGAAAAATGGCATTTGAAACCATCATTAAAGCTACCAATAATTTTGATGACAAATATCTCATTGGAATTGGAGGGCAAGGATCCGTTTACAAGGCTGAGTTGCCTTCAGGTATGGTTGCTGTGAAAAAACTTCACATGGAATCAGATGCGGAGGATAAGTTGAATTGGAAGGCATTCGAAAATGAGATCAAAGCATTGACAGAAATCAGGCACCGAAACATCATAAAGCTGTATGGTTTTTGCCAGCATTCACGATTCTTCTTTTTGGTATACAAGTACCTGGAGGGTGGCAGTTTGAATCATGTACTAGGTGATGAAAAGCAAGCAACTGCATTTGACTGGGAAAGGCGGGTGAATGTGGTTAAAGGAGTTGCTAATGCTTTGTCATATATGCATCATGGTTGCAAACCCCCTATAGTTCATCGTGACATATCAAGCAAGAATATTCTTTTGGATTCAGAATATGAAGCTCATGTCTCTGATTTTGGGACAGCTAAGTTTCTACAGCCTGGTTCAAATTGGACAACACATGCAGTAGTCACCTATGGCTATGGAGCTCCAGAGCTTGTTCAAACTATGGAAGTGACCGAAAAATGTGATGTATATAGCTTTGGAGTGCTTTGTTTCGAAATCCTTATGGGAAAGCATCCGGCAGATATGATCAATTCATTGTTGTCGCCATCAACAGCATCAATAACATACAATTTGCTATTGGTTGATGTAATTGATCAAAGGCCTCCTCATCCTGAGAAGTCAGTTGTTGGGGAAATCATGTTGATCACAAAGTGGGCGCTTGAGTGTTTGAGCCAAAGTCCACAATTTCGGCCAACCATGCATCAAGTGTCTAAAGAACTCATGATGGGAAAATCACCTTTCTCTCATGACCACTTTCCCATGATCAGACTTGGACAACTCAATGAAGAGTTATTAGAAACTCCACTTATGTGA 3216 0.4049 MPPMSQQLVFIFLCVLIVKLSWVASEKSEANALLKWKASLENQSQVALSSWKNGTSPCRWTGIQCDRSNSVTAINLENYLLKGTLHALDFSSLPNLLTFNIYNNFFHGTIPPQIGNMSKINRLNFSLNPFDGSIPQEMWTLRNIRWLDLSFCNYLTGPIPSSIANLTNLSYLDLGGNNLSCSIPPTIGKLNNLAFFSIESSKIGGSIPHEIGMLSNLEYLDFIGNDLTGNIPSTIANMSKLNQLLLSNNTLSGPIPPFLWNMSNLTLLWLDSNNFSGNIPTSIGNLVNLESLNMMKNQLSGSIPSTIGNMTNLVEISLDFNNFEGHIPASVGNLINLDTLTLQGNFLSGSIPDTIGNLNRLSMLQLSSNMLRGNIPQAVNNLTNMNGFLVDNNYLIGHLPPQICLGGSLASFVAQNNRFTGPVPSSLKNCSSIVYITLQNNHLEGDISQDFGVYPNLNYIDLSNNKFHGQISSNWGKCNSLQVLIIAKNNISGGISPQIAEATKLGRLHLFSNQLSGNIPKELGNMTNLFELRIDNNHLSGNIPPEIGLLQGLSHLNLAGNELSGNIPRQVVQLSNLLELNLSNNKLEGSIPSDSKSLETLNSLDLSGNFLNGTIPRVLGELKNLQWLNLSRNNLSGTIPSSFNGMSSLAFVNISYNQLDGPLPNNRAFLHASIESLKNNKALCGNVTGLVPCPSSPSGKSHKVKSLVLLLIFGVLALALCVIGVSVYILCRKARKKEAPAREMQPEEQFSIWSHDGKMAFETIIKATNNFDDKYLIGIGGQGSVYKAELPSGMVAVKKLHMESDAEDKLNWKAFENEIKALTEIRHRNIIKLYGFCQHSRFFFLVYKYLEGGSLNHVLGDEKQATAFDWERRVNVVKGVANALSYMHHGCKPPIVHRDISSKNILLDSEYEAHVSDFGTAKFLQPGSNWTTHAVVTYGYGAPELVQTMEVTEKCDVYSFGVLCFEILMGKHPADMINSLLSPSTASITYNLLLVDVIDQRPPHPEKSVVGEIMLITKWALECLSQSPQFRPTMHQVSKELMMGKSPFSHDHFPMIRLGQLNEELLETPLM* 1072
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy4g2396 1071 ProSitePatterns Tyrosine protein kinases specific active-site signature. 895 907 IPR008266 GO:0004672|GO:0006468
Ahy4g2396 1071 ProSiteProfiles Leucine-rich repeat profile. 576 598 IPR001611 GO:0005515
Ahy4g2396 1071 SUPERFAMILY L domain-like 411 685 - -
Ahy4g2396 1071 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 8 168 - -
Ahy4g2396 1071 Gene3D Ribonuclease Inhibitor 26 183 IPR032675 -
Ahy4g2396 1071 Gene3D Ribonuclease Inhibitor 184 279 IPR032675 -
Ahy4g2396 1071 Gene3D Ribonuclease Inhibitor 280 387 IPR032675 -
Ahy4g2396 1071 Gene3D Transferase(Phosphotransferase) domain 1 850 1051 - -
Ahy4g2396 1071 SMART LRR_typ_2 574 598 IPR003591 -
Ahy4g2396 1071 SMART LRR_typ_2 238 262 IPR003591 -
Ahy4g2396 1071 SMART LRR_typ_2 93 117 IPR003591 -
Ahy4g2396 1071 SMART LRR_typ_2 166 190 IPR003591 -
Ahy4g2396 1071 SMART LRR_typ_2 622 645 IPR003591 -
Ahy4g2396 1071 SMART LRR_typ_2 334 358 IPR003591 -
Ahy4g2396 1071 SMART LRR_typ_2 286 310 IPR003591 -
Ahy4g2396 1071 SMART LRR_typ_2 526 550 IPR003591 -
Ahy4g2396 1071 PANTHER LRR RECEPTOR-LIKE KINASE 153 250 - -
Ahy4g2396 1071 PANTHER LRR RECEPTOR-LIKE KINASE 8 168 - -
Ahy4g2396 1071 PANTHER LRR RECEPTOR-LIKE KINASE 243 1061 - -
Ahy4g2396 1071 Gene3D Ribonuclease Inhibitor 388 695 IPR032675 -
Ahy4g2396 1071 Pfam Leucine rich repeat 600 659 IPR001611 GO:0005515
Ahy4g2396 1071 Pfam Protein kinase domain 773 1039 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy4g2396 1071 Gene3D Phosphorylase Kinase; domain 1 732 849 - -
Ahy4g2396 1071 SUPERFAMILY Protein kinase-like (PK-like) 751 1041 IPR011009 -
Ahy4g2396 1071 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 153 250 - -
Ahy4g2396 1071 ProSiteProfiles Protein kinase domain profile. 771 1053 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy4g2396 1071 SUPERFAMILY RNI-like 74 397 - -
Ahy4g2396 1071 Pfam Leucine rich repeat N-terminal domain 27 66 IPR013210 -
Ahy4g2396 1071 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 243 1061 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy4g2396 Ahy-Chr4 121014535 121018201 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy4g2396 3 943 Receptor kinase-like Gene Family AT4G08850 43.022 0.0 711
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Ahy4g2396 Pkinase 2.80E-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy4g2396 - - aip:107635237 1408.28