Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy4g2389 ATGTCGAGAAAAAATCTCTTAATATTCCTCTTCTATGTCATTGTGAAACTCTCTTGTGTGGCTTTAGCTGCCATTGATGAGAAGAATGAAGAAGCAAATGCACTCTTAAAGTGGAAGGCCACCCTTGATAACAAAAGCCAACTTATCTTGGCATCTTGGAACAACGGGACAAGTCCATGCAGATGGAAAGGAATTCAGTGTGGCAAATCAAAGTCAATCACAAGCATGAACATTGAAAATTTTGGACTCGAAGGTACACTCCACACTCTCAGCTTCTCTTCATTCCCAAACCTCCTCAGCATAAACATATACAACAACTTGTTCCATGGAACCATTCCCCCGCAGATTGGTAACTTGTCAAGAGTTAATCAATTGAACTTGTCCAAAAATTTCTTTGAAGGTTCCATTCCTAAAGAGATCTTCACCTTGACAAGTCTCCACGGGCTTGATCTTTTTGAGTGCCATCTAAGTGGTCAAATCCCTGAGTCTATAGGGAATTTGGCCAACTTAACATATCTAGATTTTGGAAACAACAATCTTTCTGGCCACATTCCTACTGGGATTGGCAAATTGGACAACCTTGAGTATCTTTCTTTCATAGATAATTATCATCTTTCTGGTTCCATTCCAATGGAAATAGGAATGATGACAAACCTTCATACGATTGATTTCTCAAGCAACACTCTCTCTGGGGCTATCCCTCCTACCATTGGTAACTTGAGCAATTTGCAACAATTATACCTTTCTAATAACACACTCTCTGGGTCAATTCCACCCTCCATCTGGAACATGTCTAAGTTGACCTTGTTATATCTTAATAGCAATAACCTTTCTGGATCCATCCCTGCTTCCATAGAAAACTTAGCTAACTTAGATTCCCTTGCACTTGATAACAATCACTTTTCTGGATCCATTCCTTCCACATTGGGAAACTTGACAAAGCTCTTCGAATTATACCTCGGCTTTAATAATTTTTCTGGACCTATTCCTGCCTCTATAGGTAATCTGGTCAATTTGAATTACTTGAGCTTCCATACAAACAACTTCTCTGGAACTGTCCCTGAAACAATTGGAAACTTGAAAGGCCTCAATATGCTAGAATTGGCCACCAACAAGTTTAATGGCACCCTTCCACAGGGCATTAATAACTTGACAAGTTTGAAGACCCTTTCCGTGTCCAATAACAATTTCATTGGCCATTTGCCAACTCAAATCTGCTCAGGTGGATTACTCTCATACTTCAACGCTGAGAACAACCATTTTACTGGATCAGTGCCAAGAAGCTTGAAGAGTTGTTCTAACATTGCTAGACTCACATTACAGGGAAACCAGTTGGAAGGTGACATTGCAGAAATTTTCGGCATATATCCGAATTCAGTACATATTGATCTGAGTGATAACAAGTTTTATGGTCAGATTTCACCAAACTGGGGAAAGAGCCATAACCTTCAGAACTTGTACATGTCCAACAACAATATTTCTGGTGCTATACCACCACAAATTGTTGAGGCTACTAATCTGGGTAGGCTTCGCCTTTCTTCAAACCAACTGAATGGAAAGATTCCAAAGGAACTAGGGAATATGAAAAACTTGTTTGAACTCAGTATCAGTAACAATCATCTCTCAGGAAACATTCCACCAGAAATAGGATCATTGAAGAATCTGACAGTCTTGCACCTAGCAGGAAATGAGTTTAGCGGCAACATACCAAGAGAAGTTATGCAGTTACCCAACTTGGTTGAATTGAACTTGAGCATCAACAGACTAGAGGGAAGCATCCCCTCTGGCATTGCCTCATTGACACCTCTCTCTTCTCTTGATCTTAGCAACAATTTGTTGAATGGAACAATACCAAGGTGGCTTGGAGATCTGACGCAATTGAACTTCTTGAACCTCTCACACAATGATCTCTCTGGCAATATTCCCTCCAGTTTTGATGGCATGTCAGCCTTGATTTCTGTCAACATATCACACAACCAGTTAGAAGGGCCTCTTCCAAACAACCAAGCTTTTCTTAATGCTTCAATTTGGTCCTTGGAAAGTAACAGAGGCTTGTGTGCTAACAATGTCACCGGCTTGGAGCGATGCACAAAGAAGCATAGCCAGAAGATGGTATTGTCTCTTATCTTTGGAGCACTTGCTCTAGCACTTTGTGTGGTAGGTGTTTCAATGTATATTCTTTGCAGAAGAGGCAGAAAGAGAGAAGATGAAGTTAAAGAAGTGCAAGCAGAAGAGCACTTTTGCATATGGAGCCATGATGGGAAAATGGCATTTGAAACAATCATTCAAGCTACCAATAATTTTGATGACAAATATCTCATTGGAAATGGAGGGCAAGGATCTATTTACAAGGCTGAGTTGCCTTCAGGTATGGTTGTTGCTGTGAAGAAGCTTCATGAGAAGACTGCTATTGGGGAGGAGACATACAATTTGAAAGCATTTGAGAATGAAATCAAAGCATTGACAGAAATGAAGCACCGCAACATGATAAAGCTATATGGGTTTTGTCAACATTCACGGTTCTCATTTTTGGTTTACAAGTACTTGGAAGGTGGAAGCTTGGATCAAGTGCTAAGAGATGAAGCGGAAGCAAGTAAATTTGATTGGGGAAAGAGGGTGAATGCAATTAAAGGAGTTGCTAATGCTCTATCATATATGCATCATGATTGCATACCTCCTATAGTTCATCGCGACATATCGAGCAAGAATGTCCTTTTGGATTCAGAATATGAAGCTCATGTCTCTGATTTTGGGACAGCTAAGTTTCTTATGCCTGATTCAAGTTGGACAACACTTGTAGTCACCTATGGATACGGAGCTCCTGAGCTAGCTCAGACTATGGAAGTGACAGAGAAAAGTGATGTATATAGCTTTGGAGTGCTTTGTTTGGAGATCCTCATGGGAAAGCATCCAGGAGATTTGATCAACTCATTGTTGTCGCCAACAACAGCATCAATAACATACAATTTGTTATTGGTTGATGTCATGGATCAGAGGCCACCCCATCCTAAGAATTCAATTGTTGAGGAAATCATGTGGATCACAAAGTGGGCACTTGAGTGCTTGAGACAAAGTCCACGATCACGACCAAGCATGCATCAGATTTCTAAAGAGCTTATGATAGGAAAGTCACCTTTAGCTAATCGCCAGTTTCCTATGATCAGAATTGGGCAACTCATTGAAGAAGGATCGGGGAGTGCACTTACGTGA 3210 0.4056 MSRKNLLIFLFYVIVKLSCVALAAIDEKNEEANALLKWKATLDNKSQLILASWNNGTSPCRWKGIQCGKSKSITSMNIENFGLEGTLHTLSFSSFPNLLSINIYNNLFHGTIPPQIGNLSRVNQLNLSKNFFEGSIPKEIFTLTSLHGLDLFECHLSGQIPESIGNLANLTYLDFGNNNLSGHIPTGIGKLDNLEYLSFIDNYHLSGSIPMEIGMMTNLHTIDFSSNTLSGAIPPTIGNLSNLQQLYLSNNTLSGSIPPSIWNMSKLTLLYLNSNNLSGSIPASIENLANLDSLALDNNHFSGSIPSTLGNLTKLFELYLGFNNFSGPIPASIGNLVNLNYLSFHTNNFSGTVPETIGNLKGLNMLELATNKFNGTLPQGINNLTSLKTLSVSNNNFIGHLPTQICSGGLLSYFNAENNHFTGSVPRSLKSCSNIARLTLQGNQLEGDIAEIFGIYPNSVHIDLSDNKFYGQISPNWGKSHNLQNLYMSNNNISGAIPPQIVEATNLGRLRLSSNQLNGKIPKELGNMKNLFELSISNNHLSGNIPPEIGSLKNLTVLHLAGNEFSGNIPREVMQLPNLVELNLSINRLEGSIPSGIASLTPLSSLDLSNNLLNGTIPRWLGDLTQLNFLNLSHNDLSGNIPSSFDGMSALISVNISHNQLEGPLPNNQAFLNASIWSLESNRGLCANNVTGLERCTKKHSQKMVLSLIFGALALALCVVGVSMYILCRRGRKREDEVKEVQAEEHFCIWSHDGKMAFETIIQATNNFDDKYLIGNGGQGSIYKAELPSGMVVAVKKLHEKTAIGEETYNLKAFENEIKALTEMKHRNMIKLYGFCQHSRFSFLVYKYLEGGSLDQVLRDEAEASKFDWGKRVNAIKGVANALSYMHHDCIPPIVHRDISSKNVLLDSEYEAHVSDFGTAKFLMPDSSWTTLVVTYGYGAPELAQTMEVTEKSDVYSFGVLCLEILMGKHPGDLINSLLSPTTASITYNLLLVDVMDQRPPHPKNSIVEEIMWITKWALECLRQSPRSRPSMHQISKELMIGKSPLANRQFPMIRIGQLIEEGSGSALT* 1070
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy4g2389 1069 PRINTS Leucine-rich repeat signature 603 616 - -
Ahy4g2389 1069 PRINTS Leucine-rich repeat signature 624 637 - -
Ahy4g2389 1069 PANTHER LRR RECEPTOR-LIKE KINASE 244 1059 - -
Ahy4g2389 1069 PANTHER LRR RECEPTOR-LIKE KINASE 12 171 - -
Ahy4g2389 1069 SMART LRR_typ_2 312 336 IPR003591 -
Ahy4g2389 1069 SMART LRR_typ_2 624 647 IPR003591 -
Ahy4g2389 1069 SMART LRR_typ_2 240 264 IPR003591 -
Ahy4g2389 1069 SMART LRR_typ_2 576 600 IPR003591 -
Ahy4g2389 1069 SMART LRR_typ_2 528 552 IPR003591 -
Ahy4g2389 1069 SMART LRR_typ_2 167 191 IPR003591 -
Ahy4g2389 1069 SMART LRR_typ_2 119 143 IPR003591 -
Ahy4g2389 1069 SMART LRR_typ_2 384 408 IPR003591 -
Ahy4g2389 1069 SMART LRR_typ_2 288 311 IPR003591 -
Ahy4g2389 1069 Gene3D Ribonuclease Inhibitor 287 358 IPR032675 -
Ahy4g2389 1069 ProSiteProfiles Protein kinase domain profile. 768 1041 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy4g2389 1069 Pfam Leucine rich repeat 577 637 IPR001611 GO:0005515
Ahy4g2389 1069 Pfam Leucine rich repeat 218 277 IPR001611 GO:0005515
Ahy4g2389 1069 SUPERFAMILY Protein kinase-like (PK-like) 754 1039 IPR011009 -
Ahy4g2389 1069 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 156 254 - -
Ahy4g2389 1069 Pfam Protein kinase domain 770 1037 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy4g2389 1069 Gene3D Ribonuclease Inhibitor 27 184 IPR032675 -
Ahy4g2389 1069 Gene3D Ribonuclease Inhibitor 359 699 IPR032675 -
Ahy4g2389 1069 Gene3D Transferase(Phosphotransferase) domain 1 849 1048 - -
Ahy4g2389 1069 Gene3D Phosphorylase Kinase; domain 1 729 848 - -
Ahy4g2389 1069 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 244 1059 - -
Ahy4g2389 1069 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 12 171 - -
Ahy4g2389 1069 ProSitePatterns Tyrosine protein kinases specific active-site signature. 894 906 IPR008266 GO:0004672|GO:0006468
Ahy4g2389 1069 SUPERFAMILY RNI-like 270 662 - -
Ahy4g2389 1069 SUPERFAMILY RNI-like 75 351 - -
Ahy4g2389 1069 SMART LRR_sd22_2 480 495 - -
Ahy4g2389 1069 SMART LRR_sd22_2 312 338 - -
Ahy4g2389 1069 SMART LRR_sd22_2 600 626 - -
Ahy4g2389 1069 SMART LRR_sd22_2 167 196 - -
Ahy4g2389 1069 SMART LRR_sd22_2 216 242 - -
Ahy4g2389 1069 SMART LRR_sd22_2 264 290 - -
Ahy4g2389 1069 Gene3D Ribonuclease Inhibitor 185 284 IPR032675 -
Ahy4g2389 1069 PANTHER LRR RECEPTOR-LIKE KINASE 156 254 - -
Ahy4g2389 1069 Pfam Leucine rich repeat N-terminal domain 29 67 IPR013210 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy4g2389 Ahy-Chr4 120907996 120911873 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy4g2389 4 941 Receptor kinase-like Gene Family AT4G08850 44.096 0.0 734
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Ahy4g2389 Pkinase 2.50E-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy4g2389 - - gmx:100815688 1317.37
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy14g2715 14 134873689 134877453 Ahy4g2389 4 120907996 120911873 hybridization