Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy4g2385 ATGTATCCAAAGATTGAAGGTAGCACATACAGCAGGGGCATTATGCTCATGTACCTGTGTGTCCATGTTGTTGCTGCTGCTTCAAGTGAGAAGAGTGAAGCAAGTGCACTCTTAAAGTGGAAGGCCAGCCTTGAGAACACCAGTGTGTTGTCGTCGTGGGCAGGTACGAATCCATGCAAATGGCACGGCATTGCATGCGACAGAGCCAATTCCGTTACGGCAATAAATCTTGAAAATCATAATCTGAAAGGTACACTCCACACTCTCAGCTTCTCATCATTCCCCAACCTCCTCACCTTTAATATCTACAACAACTTCTTCTATGGAACCATACCACCACACATTGGTAACATATCCAAACTCAATACTTTGAACTTGTCTTTGAACGCTTTTGAGGGTACCATCCCTAAGGAGATGTGGACATTGACGAGTTTACGCGGGCTTGATCTTTCCCTGTGTATTTATCTTAGTGGAGTCATACCCAGTTCCATAGCAAATTTGACCAACCTATCATACCTAGATGTAGCCAAGAACAATCTTTCTGGCCACATTCCTCCTGAGATTGGAAATTTGAACAGCCTCAAGTATCTTGATCTGGCAGGTAATAAGCTTAGTGGTTCCATTCCCCACGAAATTGGAATGTTGACAAAGCTTGAGGTACTTGTTTTATCCACAAACATTCTCTTTGGAACTATCCCTTCTACCATTGGTAACCTTAGCAATCTGATTCACTTTTTTGTTTCAAATAACTCCCTCTCTGGCCCAATCCCATCCCTCATATGGAACATGTCTAACTTGTCCTGGCTATACCTTGATGACAATCGACTATCTGGATCAATCCCTCCTTCCATAGAAAACTTGGCCAATTTGGAACGCTTTGTACTTCATGGAAACAATCTTTCTGGGTCCATTCCTTCCACTGTTGGAAACATGACTAAGCTCATCTACTTGTTCATGCGCGTCAATCATTTTTCTGGATCAATTCCTGTCTCCATAGGTAATTTGATCAACTTGAAAAAACTTAGTCTCCAAGAAAACAATTTCGTCGGATTTATTCCCAACACAATTGGAAACTTAAAGAAGCTCTCGCTGCTTGAATTGTCTTTCAACAATCTTAAAGGTAGCATTCCACCATCCATAAGAAACATGACCAACCTCATGATCTTTTTAGTATCTGAAAATAATTTAACTGGAAATTTGCCACCCCAAATCTGCTCAGGGGGATCACTAGAGTCATTTTGTGCTGATAATAATCACTTTACCGGTCCAGTACCAAGAAGCTTGAAGAATTGCTCTAGTATTCAAAGAATCAGGCTACAAGGTAACCAATTGGAAGGAGATATAGCACAAGATTTTGGCATATATCCAAATTTGGGATTTATTGATCTAAGTGACAATAAATTTCATGGCCAAATTTCTCCTAACTGGGGGAGGTGCCCAAATCTTGATACCTTGATCATATCCAACAATAATATTTCCGGTAGTATACCCCCACAAATTGCAGAGGCTACTAAACTGGGTAAGCTTCAACTTTCTTCAAACCAATTGACTGGAAGGATACCAAAAGAACTAGGGAATTTGAAGAGCCTGCTTCATCTCAATATAGGCAACAATCAACTTGTAGGAAACATTCCAAAACAAGTTGTAGGGTTGCCTAATTTGTTGGAATTGAACTTGAGCAACAACAGACTAGATGGAAGCATCCCCTCTGAGTTTGATCCAATTCAACCTCTTTATTCTCTTGATCTTAGCGGGAATTCGTTGAATGGAACAATACCATCGGTGCTTGGACAGCTGAAGCAGTTGCAATTGTTGAACCTCTCACACAATAATCTCTCTGGCACAATTCCAAACACTTTTAGTAGCAGTATGTCAAGCTTGATTTCTGTCAACTTATCATACAACCAATTAAAAGGACCGGTTCCAAACGCTAGAGCTTTCCAAACAATTGAGTCACTGAAAAATAACAACGGCTTGTGTGGTAATGTCACTGGCTTGATGCCATGCCCAAGCAGCAGTTCTAGGCACAAAAGTCACACGGTCATGTTATTGGTATTACTTGTTATATTTGCAGTACTAGTGCTTTCTGTGGTGGCTGTTTCATTGTACTTTCTTTGTAAAAGTGCTAGAAACAAAAACAACTCAGCTAAAGAAGTGCAACAAGTAGAAGAACACTTTTCCATATGGAGCCATGACGGAAAAATGGCATTTGAAACTATCATTGATGCCACCAATAATTTTGATGACAAATATCTCATTGGAATTGGAGGGCAAGGATCCGTTTACAGGGCTGAGTTGCCTTCAGGTATGGTTGTTGCTGTGAAGAAGCTTCATAAGGAATCAGATGCAGGGAACAAGTCCAATTTGAAAGCATTTGAGAATGAAATCCAAGCACTGACAGAAATGAAGCACCGCAACATCATAAAGCTATACGGATATTGCCAGCATTCACGCTTCTCATTTTTGGTTTATGAGTTCTTGGAAAGTGGCAGTTTGGATCAAGCACTTGGCAGTGAAAAACAAGCAACTGCATTTGATTGGGAGAGGAGGGTGAATGTGGTTAAAGGAGTTGCAAATGCTTTGTCATATATGCATCATGATTGCAAACCCCCCATAGTTCACCGTGACATATCAAGCAAGAACATTCTGTTGGACTCAGATTATTATGAAGCTCATGTCTCTGACTTTGGAACTGCTAAGTTTTTGAACCCAGATTCAAATTGGACAACACTTGCAGTCACCTATGGCTATGGAGCTCCAGAGCTAGCTCAGACTATGGAAGTGACAGAGAAATGTGATGTATACAGCTTTGGAGTGCTTTGTTTGGAAATTCTTGTGGGAAAGCATCCAGCGGACCTAATAAGTTCATTGTTGTCACCATCAACAGCGAGAATAACATACGATTTGTTATTGGTTGATGTCATAGATCAGAGACCTCCCCTTCCTGAAATATCAATTGTTGGGGAAATAATGTGGATCACAAAGTGGGCACTTGAATGCTTGAGCCAAAGTCCACAATCTCGACCAAGCATGCATCAAGTTTCTAAAGAGCTTATGATGGGAAAACCACGTTTCCCGGATGACCAATTTGCTATGATCAGAATTGGACAACTCAATGAAGAATGGGAAACTCCACTTATGTGA 3144 0.4074 MYPKIEGSTYSRGIMLMYLCVHVVAAASSEKSEASALLKWKASLENTSVLSSWAGTNPCKWHGIACDRANSVTAINLENHNLKGTLHTLSFSSFPNLLTFNIYNNFFYGTIPPHIGNISKLNTLNLSLNAFEGTIPKEMWTLTSLRGLDLSLCIYLSGVIPSSIANLTNLSYLDVAKNNLSGHIPPEIGNLNSLKYLDLAGNKLSGSIPHEIGMLTKLEVLVLSTNILFGTIPSTIGNLSNLIHFFVSNNSLSGPIPSLIWNMSNLSWLYLDDNRLSGSIPPSIENLANLERFVLHGNNLSGSIPSTVGNMTKLIYLFMRVNHFSGSIPVSIGNLINLKKLSLQENNFVGFIPNTIGNLKKLSLLELSFNNLKGSIPPSIRNMTNLMIFLVSENNLTGNLPPQICSGGSLESFCADNNHFTGPVPRSLKNCSSIQRIRLQGNQLEGDIAQDFGIYPNLGFIDLSDNKFHGQISPNWGRCPNLDTLIISNNNISGSIPPQIAEATKLGKLQLSSNQLTGRIPKELGNLKSLLHLNIGNNQLVGNIPKQVVGLPNLLELNLSNNRLDGSIPSEFDPIQPLYSLDLSGNSLNGTIPSVLGQLKQLQLLNLSHNNLSGTIPNTFSSSMSSLISVNLSYNQLKGPVPNARAFQTIESLKNNNGLCGNVTGLMPCPSSSSRHKSHTVMLLVLLVIFAVLVLSVVAVSLYFLCKSARNKNNSAKEVQQVEEHFSIWSHDGKMAFETIIDATNNFDDKYLIGIGGQGSVYRAELPSGMVVAVKKLHKESDAGNKSNLKAFENEIQALTEMKHRNIIKLYGYCQHSRFSFLVYEFLESGSLDQALGSEKQATAFDWERRVNVVKGVANALSYMHHDCKPPIVHRDISSKNILLDSDYYEAHVSDFGTAKFLNPDSNWTTLAVTYGYGAPELAQTMEVTEKCDVYSFGVLCLEILVGKHPADLISSLLSPSTARITYDLLLVDVIDQRPPLPEISIVGEIMWITKWALECLSQSPQSRPSMHQVSKELMMGKPRFPDDQFAMIRIGQLNEEWETPLM* 1048
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy4g2385 1047 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 155 248 - -
Ahy4g2385 1047 SMART LRR_typ_2 359 382 IPR003591 -
Ahy4g2385 1047 SMART LRR_typ_2 263 286 IPR003591 -
Ahy4g2385 1047 SMART LRR_typ_2 167 190 IPR003591 -
Ahy4g2385 1047 SMART LRR_typ_2 383 407 IPR003591 -
Ahy4g2385 1047 SMART LRR_typ_2 287 311 IPR003591 -
Ahy4g2385 1047 SMART LRR_typ_2 191 215 IPR003591 -
Ahy4g2385 1047 SMART LRR_typ_2 335 358 IPR003591 -
Ahy4g2385 1047 SMART LRR_typ_2 551 574 IPR003591 -
Ahy4g2385 1047 SMART LRR_typ_2 599 622 IPR003591 -
Ahy4g2385 1047 SUPERFAMILY Protein kinase-like (PK-like) 727 1018 IPR011009 -
Ahy4g2385 1047 ProSiteProfiles Leucine-rich repeat profile. 193 215 IPR001611 GO:0005515
Ahy4g2385 1047 ProSitePatterns Tyrosine protein kinases specific active-site signature. 872 884 IPR008266 GO:0004672|GO:0006468
Ahy4g2385 1047 Gene3D Ribonuclease Inhibitor 280 379 IPR032675 -
Ahy4g2385 1047 Gene3D Ribonuclease Inhibitor 30 182 IPR032675 -
Ahy4g2385 1047 Gene3D Ribonuclease Inhibitor 183 279 IPR032675 -
Ahy4g2385 1047 PANTHER LRR RECEPTOR-LIKE KINASE 533 1038 - -
Ahy4g2385 1047 ProSiteProfiles Protein kinase domain profile. 747 1025 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy4g2385 1047 SUPERFAMILY RNI-like 365 643 - -
Ahy4g2385 1047 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 246 546 - -
Ahy4g2385 1047 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 14 170 - -
Ahy4g2385 1047 SMART LRR_sd22_2 359 385 - -
Ahy4g2385 1047 SMART LRR_sd22_2 263 289 - -
Ahy4g2385 1047 SMART LRR_sd22_2 167 193 - -
Ahy4g2385 1047 SMART LRR_sd22_2 215 241 - -
Ahy4g2385 1047 Pfam Protein kinase domain 749 1016 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy4g2385 1047 Gene3D Ribonuclease Inhibitor 382 672 IPR032675 -
Ahy4g2385 1047 Pfam Leucine rich repeat N-terminal domain 31 67 IPR013210 -
Ahy4g2385 1047 SUPERFAMILY RNI-like 75 397 - -
Ahy4g2385 1047 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 533 1038 - -
Ahy4g2385 1047 Pfam Leucine rich repeat 156 204 IPR001611 GO:0005515
Ahy4g2385 1047 Pfam Leucine rich repeat 505 564 IPR001611 GO:0005515
Ahy4g2385 1047 Pfam Leucine rich repeat 217 276 IPR001611 GO:0005515
Ahy4g2385 1047 Pfam Leucine rich repeat 578 637 IPR001611 GO:0005515
Ahy4g2385 1047 PANTHER LRR RECEPTOR-LIKE KINASE 246 546 - -
Ahy4g2385 1047 PANTHER LRR RECEPTOR-LIKE KINASE 155 248 - -
Ahy4g2385 1047 PANTHER LRR RECEPTOR-LIKE KINASE 14 170 - -
Ahy4g2385 1047 Gene3D Transferase(Phosphotransferase) domain 1 827 1027 - -
Ahy4g2385 1047 Gene3D Phosphorylase Kinase; domain 1 706 826 - -
Ahy4g2385 1047 PRINTS Leucine-rich repeat signature 578 591 - -
Ahy4g2385 1047 PRINTS Leucine-rich repeat signature 599 612 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy4g2385 Ahy-Chr4 120831893 120835412 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy4g2385 14 920 Receptor kinase-like Gene Family AT4G08850 43.111 0.0 721
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Ahy4g2385 Pkinase 5.50E-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy4g2385 - - aip:107635237 1931.38