Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy4g2379 ATGCAAGGAGGAGAGAGAAGTGGTGTTCCCAATTATGAGCTTCAAGTTCCATTCACCAACATCACCACACCTTCACAAGCCATAATCCATGAAATGAACTTTGTTCAGTTTGAAGAAAACCACCTTCTTGGCTTCTTGTCACCTACTTCATCACAATCTCAATCTTCTCAACTCTCTCAATCCTTAGATGCTGCCACCATCCTTGCCACCACAACTACGCCCGCCACAATTGCAACCACAACCGCCACAACAAAAAATTGGCATAACAAGCAGGTGGGAACTCTGGATCCAAAGGCTGTGAATGATGAAAATTGCACTGGAAATTCTAGTGAAGGCAACAATAATATTACATGGTGGAAGAGTAGTGCAGCCACAGAGAAGAACAAGGTGAAAATGAGAAGGAAACTAAGAGAGCCAAGGTTTTGTTTCCAAACAAGAAGTGATGTTGATGTTCTTGATGATGGTTATAAATGGAGGAAATATGGCCAAAAAGTTGTCAAGAACAGCCTTCATCCAAGGAGTTATTACAGGTGTACACATAGCAACTGCAGGGTGAAGAAGAGAGTTGAAAGACTCTCAGAAGATTGTAGAATGGTGATAACCACTTATGAAGGTAGACACAATCACATCCCTTCCGATGACTCAAATTCTTCAGACCATGAATGTTTCACTTCTTTTTAA 681 0.4126 MQGGERSGVPNYELQVPFTNITTPSQAIIHEMNFVQFEENHLLGFLSPTSSQSQSSQLSQSLDAATILATTTTPATIATTTATTKNWHNKQVGTLDPKAVNDENCTGNSSEGNNNITWWKSSAATEKNKVKMRRKLREPRFCFQTRSDVDVLDDGYKWRKYGQKVVKNSLHPRSYYRCTHSNCRVKKRVERLSEDCRMVITTYEGRHNHIPSDDSNSSDHECFTSF* 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy4g2379 226 Pfam WRKY DNA -binding domain 153 209 IPR003657 GO:0003700|GO:0006355|GO:0043565
Ahy4g2379 226 SMART WRKY_cls 152 211 IPR003657 GO:0003700|GO:0006355|GO:0043565
Ahy4g2379 226 ProSiteProfiles WRKY domain profile. 147 209 IPR003657 GO:0003700|GO:0006355|GO:0043565
Ahy4g2379 226 SUPERFAMILY WRKY DNA-binding domain 144 209 IPR036576 GO:0003700|GO:0006355|GO:0043565
Ahy4g2379 226 PANTHER WRKY TRANSCRIPTION FACTOR 12-RELATED 22 224 - -
Ahy4g2379 226 Gene3D WRKY domain 138 212 IPR036576 GO:0003700|GO:0006355|GO:0043565
Ahy4g2379 226 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 22 224 IPR044810 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy4g2379 Ahy-Chr4 120709667 120714215 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy4g2379 1 226 WRKY Transcription Factor Family AT2G44745 58.442 1.86e-79 236
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Ahy4g2379 WRKY 1.50E-24 CL0274
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy14g2707 14 134660649 134665124 Ahy4g2379 4 120709667 120714215 hybridization