Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy4g2357 ATGGCCGGCATAGACTTGGGTTCAGCATCACACTTTGTTCATCACCTTCAACGCCCTGACCTTGAAGATGATGATAATAACCAAGACCAAGACCCGAGCAACAACCATCACGAGGGTCTTGACCTAGTTTCGCCAAATCAAGGCCCTGGTGATGTTGTTGCTCGTAGGCCAAGAGGGAGACCTCCGGGTTCCAAGAACAAGCCTAAGCCACCGGTGATCATCACAAGGGAGAGTGCAAACACTCTTAGGGCACACATCCTTGAAGTTAGTAGTGGTTGTGATGTGTTTGACTCTGTGGCCACTTATGCAAGAAAGCGTCAACGGGGAATCTGTGTTCTTAGCGGCAGCGGAACTGTTACCAACGTCACGCTCCGACAACCAGCAGCTGCCGGAGCAGTCGTGACGCTTCATGGAAGATTTGAGATACTTTCTCTATCAGGATCCTTTCTACCACCTCCTGCTCCACCAGGGGCCACAAGTTTAACTGTGTTTCTTGGTGGAGGCCAGGGACAAGTGGTAGGAGGAAATGTTATTGGGCCTTTAGTGGCTTCTGGGCCTGTTATTGTTATTGCCTCGTCGTTTACTAATGTAGCGTATGAAAGGTTGCCCTTAGACGAAGACGAGACTCTTCAGATAGAACAAGGGCAACCTTCTGGTGGCGGTGGCGGTGTCAGTGGCAGTGGTGTTAATAACTCTTTTCCGGATCCTTCTTCGGGGTTACCGTTCTTCAATCTACCTCTAAACATGCCTAATTTGGCCGTTGATGGTTGGGCCGGTGGGAACTCTAGTGGTGGAAGACAATCTTTTTGA 810 0.4988 MAGIDLGSASHFVHHLQRPDLEDDDNNQDQDPSNNHHEGLDLVSPNQGPGDVVARRPRGRPPGSKNKPKPPVIITRESANTLRAHILEVSSGCDVFDSVATYARKRQRGICVLSGSGTVTNVTLRQPAAAGAVVTLHGRFEILSLSGSFLPPPAPPGATSLTVFLGGGQGQVVGGNVIGPLVASGPVIVIASSFTNVAYERLPLDEDETLQIEQGQPSGGGGGVSGSGVNNSFPDPSSGLPFFNLPLNMPNLAVDGWAGGNSSGGRQSF* 270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy4g2357 269 Gene3D - 82 216 - -
Ahy4g2357 269 MobiDBLite consensus disorder prediction 1 73 - -
Ahy4g2357 269 MobiDBLite consensus disorder prediction 212 231 - -
Ahy4g2357 269 Pfam Plants and Prokaryotes Conserved (PCC) domain 83 196 IPR005175 -
Ahy4g2357 269 MobiDBLite consensus disorder prediction 15 36 - -
Ahy4g2357 269 CDD DUF296 83 194 IPR005175 -
Ahy4g2357 269 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 15 269 IPR014476 GO:0003680
Ahy4g2357 269 ProSiteProfiles PPC domain profile profile. 79 218 IPR005175 -
Ahy4g2357 269 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 269 - -
Ahy4g2357 269 SUPERFAMILY AF0104/ALDC/Ptd012-like 79 210 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy4g2357 Ahy-Chr4 120547826 120549242 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy4g2357 1 269 AT-hook Motif Nuclear Localized (AHL) Family AT2G35270 56.169 2.99e-97 285
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy4g2357 - - gmx:100803960 412.535
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy14g2676 14 134392639 134394153 Ahy4g2357 4 120547826 120549242 hybridization