Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy4g2332 ATGGAGAATTTATTCAAGAGTTGGATTTCTCGACATCTGGGAATGGAAGAAGAAGAAGAAGAAAATGATGATACGATCATCATGAACAACTACTCAATGAATGAAGAGCAAGAGTTCCTAATGAAAATCTTTAATGGCCGACCAGATTTCTCATCACCAGAAAGTAGCGAACATTATTATTATTCTTCCCCCAATAATAATAACAATAATAGTTATAATAATAATGATCCTAATAATTGTGACACAAGCCCCAATAACAATAACAGTAGTGTATCATTTGAAGACACAAGAGTGCAAAAAAGTAAAAGCTCCAATTCTAGTTCTTCTACCTATCTATTATCATTTGAGCCTAATTCATTTAAAGGAAGAAGTAGAGGTGATGATGGGTTTGAATTATTTGAAGCAAGTATGAATAAAAATGATGAAGGTGGAACAACAAAAAAGCGCAAAGGAAAGACAGTAGATCACATAATAGCTGAGAGGAAAAGGAGGCAAGACCTAACAAGAAGCATCATCCAACTTTCAGCCACTATACCTGGCTTGAAGAAGATGGACAAGGCTCACGTAATTCGTGAATCTCTAAGTTACATAAAAATTCTTCAAGATCGAGTGAAAGAGTTGGAGAACCAAATCAAAGATAGAAGAGTAGATTCAGCAATATTCATAGGAAGATCACAAGACTCATTATCAACAGATAAAAGCACAATCAGCTGTGAAATAACATCAGATAACAACAATGGTGGTGGTGGTTTCAATGAATCATCACTTGAGATTGAAGCAAAAGTCATGGAAAAAGAAGTTCTCATTAGAATCCAATGTGAGAAGCAAAAAAACAACATAATAATGCTCAAAATACATGCCTTTCTTGACAAGCTTCATCTCTCTATAGCAAGTAACAGTGTGATACCATTTGGGACTTCTACTCTCGTAATAATTACCATTGTTGCTGAGATGGATAATGGTGGCAAATTCAGCATGACAATGAATGAACTAGTGAAAAGCCTCAGAGAAGATTTGATGGAGACAAACAATAATGCATGGTAG 1044 0.3496 MENLFKSWISRHLGMEEEEEENDDTIIMNNYSMNEEQEFLMKIFNGRPDFSSPESSEHYYYSSPNNNNNNSYNNNDPNNCDTSPNNNNSSVSFEDTRVQKSKSSNSSSSTYLLSFEPNSFKGRSRGDDGFELFEASMNKNDEGGTTKKRKGKTVDHIIAERKRRQDLTRSIIQLSATIPGLKKMDKAHVIRESLSYIKILQDRVKELENQIKDRRVDSAIFIGRSQDSLSTDKSTISCEITSDNNNGGGGFNESSLEIEAKVMEKEVLIRIQCEKQKNNIIMLKIHAFLDKLHLSIASNSVIPFGTSTLVIITIVAEMDNGGKFSMTMNELVKSLREDLMETNNNAW* 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy4g2332 347 Pfam Helix-loop-helix DNA-binding domain 155 201 IPR011598 GO:0046983
Ahy4g2332 347 PANTHER HELIX LOOP HELIX DNA-BINDING DOMAIN PROTEIN 7 344 - -
Ahy4g2332 347 SMART finulus 157 206 IPR011598 GO:0046983
Ahy4g2332 347 PANTHER BHLH TRANSCRIPTION FACTOR 7 344 - -
Ahy4g2332 347 MobiDBLite consensus disorder prediction 53 117 - -
Ahy4g2332 347 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 151 200 IPR011598 GO:0046983
Ahy4g2332 347 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 150 215 IPR036638 GO:0046983
Ahy4g2332 347 MobiDBLite consensus disorder prediction 53 118 - -
Ahy4g2332 347 Gene3D - 141 216 IPR036638 GO:0046983
Ahy4g2332 347 Coils Coil 190 217 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy4g2332 Ahy-Chr4 119953472 119956465 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy4g2332 155 339 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G37850 44.681 1.36e-38 138
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Ahy4g2332 HLH 2.60E-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy4g2332 - - adu:107486034 577.015
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy14g2660 14 133987574 133990841 Ahy4g2332 4 119953472 119956465 hybridization