Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy4g2326 ATGAACCTCTTTCTCCTCCAAGTGCCCATGTTCTCCTTGTTCCTCCGCCGCCATTTCTTCTCCACCAAGCTCCCTACCCTCTCCAAGGTCCCCACGCGTCACAGAACCTTCGCTCTCCGTGAAGCCCAGAACGCCCTCACTGACTACCTTCATGCCACCAGGTGCTTGCCTTTTACCTATGCAGAGCACATTGGCAACAAAGCCCTTTGTTCCCTCATGAGTCTCATTGCAAAGGTAGATTTTTCAGCCCCTACTTTCTCTAAAAGCTTTCAGAAGTTCCTTAGGTACCACCCTATTAATGAATTCGAGGTCTTCTTCGAGAGCATAGGGATAGAGTACAGTATGGTGTCTGAGTTGTTGCCTCGTGACAAGGTGTTCTTTTCTGAAGATGTGATCCTCTTTGATGCTGCTTGCACTCTTTGTGATTTCGGGTTTCCCTGGGAGAAGTTGGGGTTGTTGTATATGGCAGAAAGTTCAATATTTGGCATGAATGCTGAACAGTTGAATAGAAGGCTTTGTGGATTTAAAGGGTTTGGTTTTGGTAGCGTTGAGGTTATTGGTATATGTTTGGCTTTCCCTTTTGTTTTACTTGAGGAAGGCCAAGTGAGAGCTGGAAGAATTGAGCGACTCTTAAGTGATCTGAAATTGATATTTTTGGATTTTGGGTTGGGAAGGTTTGTTGAGGGAGATGTGGATTCTTGGCATGATATGTGTAGAAAATTAAGGGTGTTTTATGATTTAGATAGTCGGAAAGGTGTGTTAGGCGAACTAATCGGAAGGCATAAAAGTATATTTATCGATTATAGAGAAGAAGAGTTAGTTAATAAAGTGGATTATTTCTGTAGATTTGGTGTGAAGAAGGAGGAAGTGGCTCAATTGATTTTACAATGCCCGGAAATATTGAAAATGGATCTGGAGAAGCCGGTATTCAATGTAATGAAGCTGTTGACACACTTTGGCCTTAGCACTGAAGATATGGAGGAAGTAAGTCGGAGTTATGGTCATGTTATGGGAACAAATAAAATGGCTAATCTTCCTAATGTAATGAAGGCTTTAGGCTTACAAGAGTGGTTCTTCAAGAAAATCAAGGATGGAAATCATATGTTGTTAGCAGATTATATCGCAAGATATCCTAAAGAAGAACAGGATCTAGATTATCAAGAAGGTTTAAGGATAATTAGAAGTTTAAAAACACGGGTTCATAATATCGGTAAATTAAATTTCTTGCTTGGCTTGGGCTTTGGAGAAAATACTTTGTCCATAAACCTTTTGAATCATCTTCATGGCACTAGTACTGAGCTGCATGAAAGATTCGATTGCCTCCTACGTTCAAAGATTGAATTCTCCCGGCTCTGTATGATGGTAAGAACAACCCCAAGGATTCTTAACCAAAATTCGGAAACCATTGAGCAAAAGGTGAATTTCTTCCACCAGGAAATGGGAACTACTTTAAATCATGTGGAAACTTTTCCTGCAATATTGTATTATCACTTAGAGGACCGGATTATACCTAGGTACAGATTCCATAAGTGGCTTTCAGGAAAAGGTCTGAGTTGTAAGAAATATTCTATTCGAAGTATGATTGCAAACAACGAAAAAAAGTTTGTAGCTCGTGTCTTCAAAATTCATCCAGCTGCTCCAAAACATTGGTTTGAGCGATTCCGGCATGGTAAGTTGCCAGTGTAA 1686 0.4045 MNLFLLQVPMFSLFLRRHFFSTKLPTLSKVPTRHRTFALREAQNALTDYLHATRCLPFTYAEHIGNKALCSLMSLIAKVDFSAPTFSKSFQKFLRYHPINEFEVFFESIGIEYSMVSELLPRDKVFFSEDVILFDAACTLCDFGFPWEKLGLLYMAESSIFGMNAEQLNRRLCGFKGFGFGSVEVIGICLAFPFVLLEEGQVRAGRIERLLSDLKLIFLDFGLGRFVEGDVDSWHDMCRKLRVFYDLDSRKGVLGELIGRHKSIFIDYREEELVNKVDYFCRFGVKKEEVAQLILQCPEILKMDLEKPVFNVMKLLTHFGLSTEDMEEVSRSYGHVMGTNKMANLPNVMKALGLQEWFFKKIKDGNHMLLADYIARYPKEEQDLDYQEGLRIIRSLKTRVHNIGKLNFLLGLGFGENTLSINLLNHLHGTSTELHERFDCLLRSKIEFSRLCMMVRTTPRILNQNSETIEQKVNFFHQEMGTTLNHVETFPAILYYHLEDRIIPRYRFHKWLSGKGLSCKKYSIRSMIANNEKKFVARVFKIHPAAPKHWFERFRHGKLPV* 562
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy4g2326 561 PANTHER TRANSCRIPTION TERMINATION FACTOR MTEF18, MITOCHONDRIAL 23 554 - -
Ahy4g2326 561 Pfam mTERF 240 352 IPR003690 GO:0003690|GO:0006355
Ahy4g2326 561 Pfam mTERF 434 535 IPR003690 GO:0003690|GO:0006355
Ahy4g2326 561 Gene3D Transcription termination factor 3, mitochondrial 230 358 IPR038538 -
Ahy4g2326 561 Gene3D Transcription termination factor 3, mitochondrial 359 556 IPR038538 -
Ahy4g2326 561 PANTHER CGI-12 PROTEIN-RELATED 23 554 IPR003690 GO:0003690|GO:0006355
Ahy4g2326 561 SMART mt_12 484 518 IPR003690 GO:0003690|GO:0006355
Ahy4g2326 561 SMART mt_12 151 181 IPR003690 GO:0003690|GO:0006355
Ahy4g2326 561 SMART mt_12 291 322 IPR003690 GO:0003690|GO:0006355
Ahy4g2326 561 SMART mt_12 452 483 IPR003690 GO:0003690|GO:0006355
Ahy4g2326 561 SMART mt_12 256 286 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy4g2326 Ahy-Chr4 119882324 119884940 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Ahy4g2326 mTERF 5.00E-15 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy4g2326 - - adu:107486036 1115.52