Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy4g2322 ATGGCTTCGGCGAACGTGAACAGTGTGGCGCCATTTCTGAACAAGACGTACGACATGGTGGATGACTCGTCGACTGACTCGGTTGTTTCGTGGACCGATAACAGCAACAGTTTCGTCGTCTGGAATGTTCCCGAATTTGCAAGCCGAATCTTGCCCAAATACTTCAAGATTAAAAAAAGAAGGCAGGAGCCACTATCGTCCCGCAGCAAGTCTTCCGCCTTCACTGGACGTCGTTGTCATGGGGTTGCGTCGCCGTCGCTGAAACCGGTTATCTGCGTCTTCATTGGAGTGCGGCGCTTGCTCTTCTCTCAAAAGTTTGAATCTTCATCGGAGGCACCACCTGAATATTCAATAGATTCATGGGCTAGGAACTTCGAAGATGGTTCCACACAAGTGAAGAGTTTTGATGACGAGAAGACTGGTTGCTGGTTCAGTGCCACCGAGGAGGATGAGGACGAGCAGGTGTTGCAAACATGA 477 0.501 MASANVNSVAPFLNKTYDMVDDSSTDSVVSWTDNSNSFVVWNVPEFASRILPKYFKIKKRRQEPLSSRSKSSAFTGRRCHGVASPSLKPVICVFIGVRRLLFSQKFESSSEAPPEYSIDSWARNFEDGSTQVKSFDDEKTGCWFSATEEDEDEQVLQT* 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy4g2322 158 SMART hsfneu3 8 135 IPR000232 GO:0003700|GO:0006355|GO:0043565
Ahy4g2322 158 PANTHER HEAT STRESS TRANSCRIPTION FACTOR A-1E-LIKE 2 56 - -
Ahy4g2322 158 SUPERFAMILY "Winged helix" DNA-binding domain 8 59 IPR036390 -
Ahy4g2322 158 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 2 56 IPR027725 -
Ahy4g2322 158 PRINTS Heat shock factor (HSF) domain signature 50 62 IPR000232 GO:0003700|GO:0006355|GO:0043565
Ahy4g2322 158 PRINTS Heat shock factor (HSF) domain signature 12 35 IPR000232 GO:0003700|GO:0006355|GO:0043565
Ahy4g2322 158 Pfam HSF-type DNA-binding 12 59 IPR000232 GO:0003700|GO:0006355|GO:0043565
Ahy4g2322 158 Gene3D - 4 62 IPR036388 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy4g2322 Ahy-Chr4 119838248 119838831 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy4g2322 2 56 HSF AT3G02990 67.273 2.88e-20 84.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Ahy4g2322 HSF_DNA-bind 4.10E-12 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy4g2322 K09419 - ahf:112795326 313.923