Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy4g2309 ATGGCTTCAATGAACTTGCTGGGTTTCTCTCTCTCCCCTCAAGAGCAACACACTACTACTACTCATCATCATCATCAAACTCGTTTTGGGCTATTCAATCCCACTGCACAAGATGATGTAACTGCTGCTGATGATGGAAACTGCTTCGATCTCACTCCTTCCACTCATGCCGCTACTACTCTCAACCTCCCTCCTTTTCCCATCTATCAAGAACCCTTCAACAATCATCATCATCTTTCTACTCATCAAGATTGGAAGGAGAATAACTACATCAACCAAAACCTGCTATTAGAAACTTCATGCAACAACAATAACAATGTCGACAACAACCACCACCACCATCACCAACAACCCAAGCTCGAGAACTTCCTCGGTGGACACTCCTTCGCCGATCATCATCACGATTACGGTGCCAACTCATCAGGAGACTACCTCTTCCAAAACTGCTCTCACCCGGAAGTTACAGCAGGAGGAGGAGAAGGCTCCGCCGGCGGCGGCGGTGGAAGCACAAACTCAATAGGGTTGTCAATGATAAAAACATGGCTAAGGAACCAACCACTTCATCATCATCACTCATCAGAAAACAAAGAAACCATGATTGCATCTTCAAATAATACTACTGCACCAACAACTCAAACCTTGTCGCTTTCTATGAGTACTGGCTCACAATCTCTCCCGCTATTACCACCTACTAATAATAATAATGTTAGTGTTGCCGGTGCCGGTGCCGGAGGAGGCGGCGGAGACAGTTATTCTTCGTCGGAAATAAACAGCAACAACAACAACAAACAGATAGTAGTAGTAGCAGGAGGGTCTTCATCAACGGGAGCAGTTGAAAATGGAAGCATTGTTGAGAATAACAATGTGACCAAAAAATCCATTGACACTTTTGGACAAAGAACTTCCATTTACCGTGGTGTAACAAGGCATAGGTGGACAGGGAGATATGAAGCTCATTTGTGGGATAATAGTTGTAGAAGAGAGGGACAGACTCGCAAAGGGAGGCAAGTTTACCTGGGAGGTTATGATAAAGAGGAAAAAGCAGCTAGAGCCTATGATTTAGCAGCCCTAAAATACTGGGGAACCACAACAACAACAAATTTTCCGATTAGTCAATATGAAAAAGAATTAGAAGAAATGAAGCACATGACAAGACAAGAGTACGTTGCGTCATTGAGAAGGAAGAGTAGTGGATTTTCTCGTGGTGCATCCATTTATCGTGGAGTAACAAGGCATCATCAACATGGTAGATGGCAAGCTCGGATTGGAAGAGTTGCAGGCAACAAAGATCTTTATCTAGGAACTTTTAGCACTCAGGAAGAGGCAGCAGAAGCATATGACATAGCAGCCATAAAGTTCCGAGGTTTGAATGCAGTTACAAACTTTGACATGAACAGATACGATGTGAAGAGCATACTAGAGAGCAGCACCTTGCCCATTGGTGGCGCCGCCAAGAGGTTGAAGGACATGGACAATGGAGACCTAATTAATGTAGACAATAGTGTTCACCAAAGACAACACCAAGAAGATCACAGCAACAACATCAATTCTCATTCTCTAACTGATGGAATCAACAACTTTGTAACTGCGGCGGCTGCCACCCATCATGGTGGTTGGCCTGCTTCCCTTGCATTCCATCACTACCCTGCTAACTATGGATCTTCATCATCATCATCACAAAGGTTCTGGTGCAAGCAAGAGCAAGATTCTTCTGATCAAAACAATGTGTCTCACAATTTTCATCAAGAGATTCATCCTTTGCAACTAGGGGGTAGTACCCACAATTTCTTTCAGCATGGTATCATGACATTGGATCATTCTGCTTCCATGGATAACAATAACAGCTCTGGATCAAGTTCTGTGGTTTATGGTGGGGGTGGTGGTGGTGGTGATGTCAACGGTTATGTGTTTCAAATGGGTGCTGTTATTGGCAATGATAACAATGAAATCAAGGGACTTGGCTATGAAAGTGTTTTTGGCAGTGAGGCATATAATCAAACACATGGAAGGCATCTGTATTATCAGCAACAATCATCAACAATGGATCATAACAATAATGGAGCTGTAGTAGTTAAGGGTAGCCCATATGATCATCATCATCATCATGGTGGTGGTTCCAACAATTGGGTTCCAACTGCAATACCCACTCTTGCAGCATCAAGGGGTCTCTGCCATGGGGCTCCACCATTCACATTATTGCATGAATGA 2208 0.4366 MASMNLLGFSLSPQEQHTTTTHHHHQTRFGLFNPTAQDDVTAADDGNCFDLTPSTHAATTLNLPPFPIYQEPFNNHHHLSTHQDWKENNYINQNLLLETSCNNNNNVDNNHHHHHQQPKLENFLGGHSFADHHHDYGANSSGDYLFQNCSHPEVTAGGGEGSAGGGGGSTNSIGLSMIKTWLRNQPLHHHHSSENKETMIASSNNTTAPTTQTLSLSMSTGSQSLPLLPPTNNNNVSVAGAGAGGGGGDSYSSSEINSNNNNKQIVVVAGGSSSTGAVENGSIVENNNVTKKSIDTFGQRTSIYRGVTRHRWTGRYEAHLWDNSCRREGQTRKGRQVYLGGYDKEEKAARAYDLAALKYWGTTTTTNFPISQYEKELEEMKHMTRQEYVASLRRKSSGFSRGASIYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTQEEAAEAYDIAAIKFRGLNAVTNFDMNRYDVKSILESSTLPIGGAAKRLKDMDNGDLINVDNSVHQRQHQEDHSNNINSHSLTDGINNFVTAAAATHHGGWPASLAFHHYPANYGSSSSSSQRFWCKQEQDSSDQNNVSHNFHQEIHPLQLGGSTHNFFQHGIMTLDHSASMDNNNSSGSSSVVYGGGGGGGDVNGYVFQMGAVIGNDNNEIKGLGYESVFGSEAYNQTHGRHLYYQQQSSTMDHNNNGAVVVKGSPYDHHHHHGGGSNNWVPTAIPTLAASRGLCHGAPPFTLLHE* 736
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy4g2309 735 MobiDBLite consensus disorder prediction 1 25 - -
Ahy4g2309 735 ProSiteProfiles AP2/ERF domain profile. 405 463 IPR001471 GO:0003700|GO:0006355
Ahy4g2309 735 CDD AP2 302 371 IPR001471 GO:0003700|GO:0006355
Ahy4g2309 735 PRINTS Ethylene responsive element binding protein signature 445 465 IPR001471 GO:0003700|GO:0006355
Ahy4g2309 735 PRINTS Ethylene responsive element binding protein signature 304 315 IPR001471 GO:0003700|GO:0006355
Ahy4g2309 735 Pfam AP2 domain 405 455 IPR001471 GO:0003700|GO:0006355
Ahy4g2309 735 Pfam AP2 domain 303 361 IPR001471 GO:0003700|GO:0006355
Ahy4g2309 735 SUPERFAMILY DNA-binding domain 404 464 IPR016177 GO:0003677
Ahy4g2309 735 SUPERFAMILY DNA-binding domain 302 371 IPR016177 GO:0003677
Ahy4g2309 735 SMART rav1_2 405 469 IPR001471 GO:0003700|GO:0006355
Ahy4g2309 735 SMART rav1_2 303 375 IPR001471 GO:0003700|GO:0006355
Ahy4g2309 735 Gene3D AP2/ERF domain 405 465 IPR036955 GO:0003700|GO:0006355
Ahy4g2309 735 Gene3D AP2/ERF domain 303 371 IPR036955 GO:0003700|GO:0006355
Ahy4g2309 735 CDD AP2 404 463 IPR001471 GO:0003700|GO:0006355
Ahy4g2309 735 MobiDBLite consensus disorder prediction 1 17 - -
Ahy4g2309 735 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR BBM 5 632 - -
Ahy4g2309 735 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 5 632 - -
Ahy4g2309 735 ProSiteProfiles AP2/ERF domain profile. 303 369 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy4g2309 Ahy-Chr4 119614947 119619451 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy4g2309 277 492 AP2-EREBP Transcription Factor Family AT5G17430 87.097 1.35e-133 403
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-AP2 Ahy4g2309 AP2 1.70E-12 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy4g2309 K09285 - gmx:100797584 699.508
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy14g2640 14 133678060 133682654 Ahy4g2309 4 119614947 119619451 hybridization