LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Ahy4g2281	ATGGCCAATAATTCTATTCTATCATCATCACTAATCTGTTGCTTATTATTTCTTTTGTTGAATCACCATTATTGGATCTTTGTTGAAGCTGCTCCTTCAGCTTCTCTTGTTACACAACTCCCTGGCTTTGATTCCAATTTCCCATCCAACCATTACTCCGGATACATAAATATTGATGGAAATGGTGAGAATGGGAAGAACCTGTTCTACTACTTGGTTAGTTCAGAAAGAAATCCAAAGAAGGATCCACTTGTTCTGTGGCTCAATGGTGGTCCTGGCTGCTCTAGTTTTGATGGATTTGTTTATGAGCATGGACCGTTCAACTTTGAGGCAGCAAAATCAAAAGGGAGTCTCCCCACTTTGCATACTAATCCTTACAGCTGGTCTAAGGTTTCAAATATAATATATTTGGATTCTCCAGTAGGGGTTGGGCTCTCATACTCCAAGAACTCGACCAAATATGTTACTGGGGACCTACAAACCGCGTCTGATACCCATGCTTTCCTCTTAAAGTGGTTAGAGCAATATCCGGAATTCCTGGCTAATCCATTCTATATTGCTGGCGAATCGTATGCTGGAGTTTATGTGCCCACTCTAGCTTTTGAAGTAGCAAAAGGAATCCGGAGTGGTACAAAGCCCGTGATCAACTTTAAGGGTTACATGGTGGGTAATGGTGTCACGGACGAGATTTTTGATGGAAATGCTCTTCTCCCATTTGTGCATGGAATGGGCCTCATATCCGACAGTATCTATGAGGATGTAGAAACTTCCTGCAAGGGAAACTTCTACAAATATTACTCTGAGGATACTGAAGATAATAATGATGATTCATGCAGTAAGAGCTTTGAAAAAGTTGATAGAGCTATCGAAGGCCTTAACGTGTATGATATATTGGAACCATGTTACCATGAAGGAGATTCAAATTCAGCATGGATGAAAGCAGCCATTGCTAATGGAACATTGCCAAAGAGTTTTCAAGAATTAGGGTTAACTAATAATAATGATGAGAGGCATCTCAAAGTGAGGAAGAGGATGTTTGGTAGAGCTTGGCCTTTTAGGGCACCTCTCAAACAAGGCCTTGTTCCGTTGTGGCCCCAATTATTGGCTCAAACCAGACATGTTGCTTGTGTTAGTGATGTAGTTGCAAGTTCATGGCTAAACAACAATGCAGTAAGGAAAGCCATTCATGCTGAGGAGGAAAGTGTGACAGGGGCATGGGAATTATGCACCGGAAAGATAGAATACAGTCATGATGCTGGAAGCATGATTCCTTACCACAAGAACTTAACTGCCCTTGGTTATAGGGCACTTATTTTCAGATATTTACAAGGATATGACAACAACCTTATCTTTCTTACGGTTAAGGGAGCTGGGCACACGGTGCCAGAGTATAAGCCACGTGAAGCACTTGATTTTTACACTCGTTGGTTGGAAGGAAGACCAATATAA	1449	0.4141	MANNSILSSSLICCLLFLLLNHHYWIFVEAAPSASLVTQLPGFDSNFPSNHYSGYINIDGNGENGKNLFYYLVSSERNPKKDPLVLWLNGGPGCSSFDGFVYEHGPFNFEAAKSKGSLPTLHTNPYSWSKVSNIIYLDSPVGVGLSYSKNSTKYVTGDLQTASDTHAFLLKWLEQYPEFLANPFYIAGESYAGVYVPTLAFEVAKGIRSGTKPVINFKGYMVGNGVTDEIFDGNALLPFVHGMGLISDSIYEDVETSCKGNFYKYYSEDTEDNNDDSCSKSFEKVDRAIEGLNVYDILEPCYHEGDSNSAWMKAAIANGTLPKSFQELGLTNNNDERHLKVRKRMFGRAWPFRAPLKQGLVPLWPQLLAQTRHVACVSDVVASSWLNNNAVRKAIHAEEESVTGAWELCTGKIEYSHDAGSMIPYHKNLTALGYRALIFRYLQGYDNNLIFLTVKGAGHTVPEYKPREALDFYTRWLEGRPI*	483

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Ahy4g2281	482	SUPERFAMILY	alpha/beta-Hydrolases	37	481	IPR029058	-
	Ahy4g2281	482	Gene3D	alpha/beta hydrolase	29	336	IPR029058	-
	Ahy4g2281	482	PANTHER	SERINE CARBOXYPEPTIDASE-LIKE 20	441	480	-	-
	Ahy4g2281	482	ProSitePatterns	Serine carboxypeptidases, serine active site.	186	193	IPR018202	GO:0004185
	Ahy4g2281	482	PRINTS	Carboxypeptidase C serine protease (S10) family signature	449	462	IPR001563	GO:0004185\|GO:0006508
	Ahy4g2281	482	PRINTS	Carboxypeptidase C serine protease (S10) family signature	137	147	IPR001563	GO:0004185\|GO:0006508
	Ahy4g2281	482	PRINTS	Carboxypeptidase C serine protease (S10) family signature	124	136	IPR001563	GO:0004185\|GO:0006508
	Ahy4g2281	482	PRINTS	Carboxypeptidase C serine protease (S10) family signature	172	197	IPR001563	GO:0004185\|GO:0006508
	Ahy4g2281	482	Pfam	Serine carboxypeptidase	441	479	IPR001563	GO:0004185\|GO:0006508
	Ahy4g2281	482	Pfam	Serine carboxypeptidase	41	439	IPR001563	GO:0004185\|GO:0006508
	Ahy4g2281	482	PANTHER	SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE	441	480	IPR001563	GO:0004185\|GO:0006508
	Ahy4g2281	482	PANTHER	SERINE CARBOXYPEPTIDASE-LIKE 20	25	439	-	-
	Ahy4g2281	482	PANTHER	SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE	25	439	IPR001563	GO:0004185\|GO:0006508
	Ahy4g2281	482	ProSitePatterns	Serine carboxypeptidases, histidine active site.	449	466	IPR033124	GO:0004185
	Ahy4g2281	482	Gene3D	-	440	482	-	-
	Ahy4g2281	482	Gene3D	-	373	439	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Ahy4g2281	Ahy-Chr4	119231603	119240496	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Ahy4g2281	381	482	Calmodulin-binding Proteins	AT2G22960	30.000	3.80e-14	68.9

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Ahy4g2281	K16296		-	gmx:100790895	739.569

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Ahy14g2609	14	133248432	133257282	Ahy4g2281	4	119231603	119240496	hybridization
	Ahy4g2281	4	119231603	119240496	Ahy12g0192	12	3143916	3146536	PCT
	Ahy4g2281	4	119231603	119240496	Ahy2g0223	2	2550271	2552738	PCT