Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy4g2278 ATGAGCTCGAAGGAGAGACCCACTCTTGGTGGCACGCGGATTAAGACCCGCAAACGGAATATTGCAGCGCCGCTGGACCCTGCAGCATTCGCGGATGCAGTGGTCCAGATTTATTTGGATAATGCTGGTGATCTGGAACTTGTTGCTAAGAACATTGAATCTTCAGACCTTAACTTCTCAAGATACGGTGACACCTTTTTTGAGGTTGTTTTCACTGGGGGTCGTACACAACCTGGAACTACCAAGCCTGATGAGGGGGAGCGCCATCCATACTCTATAATAGAGTGTGAGCCAAAGCGTGAAGTCATCTTACCATCTGTAATCTACATACAAAAGATTTTGAGGCGAAGGCCATTCCTCATTAAGAACCTCGAAAATGTTATGCAAAAGTTCCTCCAGTCCTTGGAGCTTTTCGAGGAAAATGAGAGGAAAAAGCTGGCAATCTTCACAGCACTTGCATTCTCCCAGAAGCTCTCTGGTCTTCCGCCAGAGACCGTGTTCCAACCACTTCTTAAGGATAACCTTGTGGCCAAAGGGCTAGTTCTGTCATTCATAACCGACTTCTTTAAGGAGTATCTGATTGACAACAGCCTTGATGATCTTATTTCAATTTTGAAAAGAGGAAAAGTAGAGGATAACCTCTTGGAGTTTTTCCCTCCTACAAAAAGATCCAACGAGTCTTTCTCTGAGCATTTCAGCAAGGAAGGACTAGTGGCATTGGTTGAGTACAATGAGAAGAAAATATTTGAGGTGAAACTTAAGGAAATGAAGTCTGCTTTGACAACTCAGATAACGGAGGAGGTTGATATATCTGAAGTAATTGAGAATGTGAAGGTGCGGGTCCGAGATGCTAAATTGCCAGATATTGAAGTTGTCCGGGTATTGTGGGATGTTTTGATGGATGCTGTCCAGTGGTCAGGGAAAAATCAGCAACAGAATGCAAATTCAGCCCTACGCCAGGTAAAAACCTGGGCAGAACTGTTGAACACATTCTGCACCACTGGGAAGCTGGAGCTAGAACTGATGTACAAGGTACAGATGCAATGCTACGAAGATGCAAAACTGATGAAGCTGTTCCCGGAGATTATTAGATCGCTCTACGAGCAGGATGTGCTGGCTGAAGACACCATCCTTCATTGGTTCCGCAAAGGAACAAACACGAAGGGCAGGCAAACCTTTGTGAAAGCATTGGAACCCTTTGTGAATTGGCTGGAGGAGGCAGAAGAGGAGGAATAA 1236 0.4506 MSSKERPTLGGTRIKTRKRNIAAPLDPAAFADAVVQIYLDNAGDLELVAKNIESSDLNFSRYGDTFFEVVFTGGRTQPGTTKPDEGERHPYSIIECEPKREVILPSVIYIQKILRRRPFLIKNLENVMQKFLQSLELFEENERKKLAIFTALAFSQKLSGLPPETVFQPLLKDNLVAKGLVLSFITDFFKEYLIDNSLDDLISILKRGKVEDNLLEFFPPTKRSNESFSEHFSKEGLVALVEYNEKKIFEVKLKEMKSALTTQITEEVDISEVIENVKVRVRDAKLPDIEVVRVLWDVLMDAVQWSGKNQQQNANSALRQVKTWAELLNTFCTTGKLELELMYKVQMQCYEDAKLMKLFPEIIRSLYEQDVLAEDTILHWFRKGTNTKGRQTFVKALEPFVNWLEEAEEEE* 412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy4g2278 411 ProSiteProfiles W2 domain profile. 246 411 IPR003307 GO:0005515
Ahy4g2278 411 SMART 542_3 325 410 IPR003307 GO:0005515
Ahy4g2278 411 SUPERFAMILY ARM repeat 252 408 IPR016024 -
Ahy4g2278 411 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 1 411 - -
Ahy4g2278 411 CDD W2_eIF5C_like 216 404 IPR043510 -
Ahy4g2278 411 PANTHER BASIC LEUCINE ZIPPER AND W2 DOMAIN-CONTAINING PROTEIN 1 411 - -
Ahy4g2278 411 Gene3D - 243 411 - -
Ahy4g2278 411 Coils Coil 121 141 - -
Ahy4g2278 411 Pfam eIF4-gamma/eIF5/eIF2-epsilon 338 411 IPR003307 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy4g2278 Ahy-Chr4 119188117 119191998 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy4g2278 300 407 Eukaryotic Initiation Factors Gene Family AT2G34970 31.818 6.86e-09 55.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy4g2278 - - gmx:100782537 773.081
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy14g2604 14 133191488 133195579 Ahy4g2278 4 119188117 119191998 hybridization