Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy4g2248 ATGGTTTCTTTGTCAACAAACCCCTTCTTTTCTCTAACCACCCAAAACGCTGCGTCTCGTTCTTCTTCTTCTTCTTCTTCGTTGTATTCGAGATTCGCGGCTTCAACCAAGTTCAATTCTTTCCACGCAAATAATAAAGATCATAGAAAGGTTGTTTGTGCTTGCGTCGCTCCTCCAACGAACTTCAAGAGCGAAGACTCTTCCGCCCTCAGATTCAATGGTTCATCGAAATCGGAGCAATTGAGCACACTTCGGGAACAAGATGGTGACTCTGATGTTCTTATTGAGTGTAGAGACGTCTACAAGTCATTTGGGGAAAAGAAAATCCTCAATGGTGTTAGCTTCAAGATTAGACATGGGGAAGCAGTTGGAATAATCGGTCCTTCTGGGACTGGAAAATCCACAGTTTTAAAGATTATTGCAGGATTACTTATTCCAGATAAGGGTGAGGTTTATATTCGAGGTAGAAAGAGAGTTGGTCTGGTAAGCGATGATGAGCTACATGGTCTTCGCATTGGATTAGTGTTCCAAAGTGCAGCACTTTTTGATTCTTTGACTGTCCGTGAAAATGTTGGTTTTCTCTTGTATGAACACTCAAGCATGCCTGAAGACCAGATATCAGAGGTTGTCAAGGAAACCTTGGCTGCTGTTGGATTGAAGGGAGTTGAGAATCGGTTGCCTTCTGAGTTATCAGGTGGAATGAAAAAACGAGTTGCTTTAGCTCGATCTATTATTTATGACAATTCAAAGGATTCAATTGAGCCTGAGGTTCTCTTATATGATGAACCAACTGCTGGACTAGATCCCATTGCATCAACTGTTGTTGAGGATCTAATTCGTTCAGTGCACATAAAAGGACAAGATGCACGTGGGAAACCCGGGAACATTGCATCATATGTGGTCGTCACTCACCAACATAGTACCATTAAAAGAGCCATTGACAGGTTGGTGTTTCTACACAAGGGAAAGATTGTTTGGGAAGGAATGACTCATGAATTTACAACATCAACAAATCCAATTGTTCAACAGTTTGCATCTGGGAGCCTGGAGGGTCCTATCAAATACTAG 1068 0.4195 MVSLSTNPFFSLTTQNAASRSSSSSSSLYSRFAASTKFNSFHANNKDHRKVVCACVAPPTNFKSEDSSALRFNGSSKSEQLSTLREQDGDSDVLIECRDVYKSFGEKKILNGVSFKIRHGEAVGIIGPSGTGKSTVLKIIAGLLIPDKGEVYIRGRKRVGLVSDDELHGLRIGLVFQSAALFDSLTVRENVGFLLYEHSSMPEDQISEVVKETLAAVGLKGVENRLPSELSGGMKKRVALARSIIYDNSKDSIEPEVLLYDEPTAGLDPIASTVVEDLIRSVHIKGQDARGKPGNIASYVVVTHQHSTIKRAIDRLVFLHKGKIVWEGMTHEFTTSTNPIVQQFASGSLEGPIKY* 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy4g2248 355 SMART AAA_5 119 323 IPR003593 -
Ahy4g2248 355 ProSitePatterns ABC transporters family signature. 230 244 IPR017871 GO:0005524
Ahy4g2248 355 Gene3D - 82 348 IPR027417 -
Ahy4g2248 355 PANTHER PROTEIN TRIGALACTOSYLDIACYLGLYCEROL 3, CHLOROPLASTIC 18 355 - -
Ahy4g2248 355 CDD ABC_Org_Solvent_Resistant 95 344 - -
Ahy4g2248 355 Pfam ABC transporter 110 265 IPR003439 GO:0005524
Ahy4g2248 355 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 95 346 IPR003439 GO:0005524
Ahy4g2248 355 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 93 336 IPR027417 -
Ahy4g2248 355 PANTHER PROTEIN TRIGALACTOSYLDIACYLGLYCEROL 3, CHLOROPLASTIC 18 355 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy4g2248 Ahy-Chr4 118727532 118732282 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy4g2248 101 339 Calmodulin-binding Proteins AT2G36910 28.800 1.25e-15 76.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy4g2248 - - adu:107486109 677.937
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy14g2566 14 132576155 132580927 Ahy4g2248 4 118727532 118732282 hybridization