Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy4g2238 ATGGAGCTTCAATACCTCAACATTATTTTCACAATCTTCATTCTCTTATCTCTATTTCCTCAATATCTCCATTGCCAACAACAATTCCTCAATGAAACTGTCTTTGACTGCTCCAGCAACCCTTCCACACCAAAAGGGTACCTCTGCAATAGTCCTAAAAAATCATGCACTTCCTTCTTAGTTTACAGGTCCAAACCTCCCTATAACACCCCTCAAACCATTTCAAATCTTCTTGCTTCTGAAGAATCCACAGTATCCTCCATCAACAAAATTTCAAGTAATAAAAAAATTCCTACCAACAAATCAATAATTGTTCCTGTGTCTTGCTCCTGTTCTGGAAATATTTATCAACACAATGCTTTTTACACAGTCAATAAGGATGACACATATTTCATGTTAGTGAACACTACTTACCAAGGCCTCACAACATGCCAGGCTTTGATGGGACAGAACTACTATGCTTCTGTCAACATTGCCATTGGTGCTCAGCTCACAGTTCCCATGCTATGTGCTTGTCCAACTGCAAACCAAACAGCAAAAGGCGTGACATCATTGCTCGTTTACTCGCTTGGCGAAGGCGACACAATCAAGTCAATAGGAGAGACTTATGGTGTTGATGAACAAAGTATTCTTGATGCCAATGAGCTGAACCAGACATCAAATGGAAACAGAAGCTTGAGCCTTATGGCGAGGACTCCGATTTTGATTCCATTGAGGGGTAAGAGCTGCAAAGATGATCCAGAGAGTTTCTATTGTACATGTTCTCAGGGAGATGTCACAAATTCAAGCCTCATGGGACTCAACTGTGAAGAATCAGATGGTCAAAAATTTCCTGCTAAATTGGTTGCAGCACTAGGTGTTGGCATTGGTGCTGGCTTTCTCTGTTTGTTTCTTCTTGGTTATAAGCTGTACCAATGCATACAGAAAAAGAGAGAAAAACTTCATAAAGAAAAGCTGTTCAAGCAAAATGGTGGCTACTTGCTACAAGAGAAGGTCTCATCTTATACAAATGGACAAAGGACAAAGCTTTTTACCGAGGAGGAGCTGAAGAGAGCAACAGATAACTACAACCAGAGTAGGTTCCTTGGTCAAGGTGGCTTTGGCACGGTCTACAAAGGAATGTTACCGGACGGAACCATAGTCGCCGTTAAGAGATCAAAAGAGATGGAAAGGAACCAGATACAGACTTTTGTCAATGAAGTTGTGATTCTATCACAGATTAACCACAGGAACATTGTTAAACTCTTGGGGTGTTGTCTTGAGACAGAAGCACCATTACTTGTCTATGAATTTATTCCAAATGGAACACTTTCTGACCATATTCATGTGAAAGAGGACGAGTCATCATCGCTTTCATGGGATGGCCGCCTTCAAATTGCTTGTGAGGTAGCTGGAGCAGTGGCCTATATGCATTCTGCAGCTTCTGTTCCTATCTTCCATAGAGACATCAAACCTTCAAACATACTCCTAGACAGCAACTACAGTGCTAAAGTTTCTGATTTTGGAACATCTAAATCACTTCCATTGGATAATACTCACTTGACAACTGCAGTAAGAGGAACTTTTGGGTACATAGATCCTGAGTATTTTCAGTCCAATCAATATACAGATAGAAGTGATGTGTATAGTTTCGGAGTTGTGCTTGTTGAGCTCATAACTGGGAGGAAACCACTTTCATTGTTACAAGATGAGGGTCAGCATCTGATAGCAGAATTCATTTCTCTGATGAAGGAGAACCAGCTTTCTGAAATTCTGGATGCCAAAGTGCTCAAGGAAGCAAGGGAAGATCACATTCTTGCCATTGCAAATCTTGCAATGAGATGCTTGAGACTCAGTGGGAAGAAAAGACCAACCATGAAAGAAGTTTCAGCAGAACTAGAAGCATTGAGAACAGCAAAGAGTTCCGTACTTATCGACCTTGACCACATCTCGCCTGAAGATGGTGGATCACCTAGCCACACCACCAGGGGACCAATTCAAGAATCTGGAGAGGAAAGCATTTTGGTATCCCTACAAATGGAGTCCACATCCTTCTAA 2037 0.4138 MELQYLNIIFTIFILLSLFPQYLHCQQQFLNETVFDCSSNPSTPKGYLCNSPKKSCTSFLVYRSKPPYNTPQTISNLLASEESTVSSINKISSNKKIPTNKSIIVPVSCSCSGNIYQHNAFYTVNKDDTYFMLVNTTYQGLTTCQALMGQNYYASVNIAIGAQLTVPMLCACPTANQTAKGVTSLLVYSLGEGDTIKSIGETYGVDEQSILDANELNQTSNGNRSLSLMARTPILIPLRGKSCKDDPESFYCTCSQGDVTNSSLMGLNCEESDGQKFPAKLVAALGVGIGAGFLCLFLLGYKLYQCIQKKREKLHKEKLFKQNGGYLLQEKVSSYTNGQRTKLFTEEELKRATDNYNQSRFLGQGGFGTVYKGMLPDGTIVAVKRSKEMERNQIQTFVNEVVILSQINHRNIVKLLGCCLETEAPLLVYEFIPNGTLSDHIHVKEDESSSLSWDGRLQIACEVAGAVAYMHSAASVPIFHRDIKPSNILLDSNYSAKVSDFGTSKSLPLDNTHLTTAVRGTFGYIDPEYFQSNQYTDRSDVYSFGVVLVELITGRKPLSLLQDEGQHLIAEFISLMKENQLSEILDAKVLKEAREDHILAIANLAMRCLRLSGKKRPTMKEVSAELEALRTAKSSVLIDLDHISPEDGGSPSHTTRGPIQESGEESILVSLQMESTSF* 679
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy4g2238 678 Gene3D Phosphorylase Kinase; domain 1 321 431 - -
Ahy4g2238 678 Pfam Protein kinase domain 356 623 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy4g2238 678 ProSitePatterns Protein kinases ATP-binding region signature. 362 384 IPR017441 GO:0005524
Ahy4g2238 678 MobiDBLite consensus disorder prediction 648 666 - -
Ahy4g2238 678 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 26 658 IPR045274 GO:0007166
Ahy4g2238 678 SUPERFAMILY Protein kinase-like (PK-like) 334 626 IPR011009 -
Ahy4g2238 678 ProSiteProfiles Protein kinase domain profile. 356 629 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy4g2238 678 SMART serkin_6 356 629 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy4g2238 678 CDD STKc_IRAK 362 629 - -
Ahy4g2238 678 Pfam LysM domain 191 219 IPR018392 -
Ahy4g2238 678 PANTHER LYSM TYPE RECEPTOR KINASE 26 658 - -
Ahy4g2238 678 ProSitePatterns Serine/Threonine protein kinases active-site signature. 478 490 IPR008271 GO:0004672|GO:0006468
Ahy4g2238 678 Gene3D Transferase(Phosphotransferase) domain 1 432 638 - -
Ahy4g2238 678 MobiDBLite consensus disorder prediction 641 666 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy4g2238 Ahy-Chr4 118578705 118581187 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy4g2238 276 632 Receptor kinase-like Gene Family AT1G16130 54.848 2.19e-134 411
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Ahy4g2238 Pkinase 7.00E-52 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy4g2238 - - gmx:100795455 951.044
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy14g2550 14 132413455 132414870 Ahy4g2238 4 118578705 118581187 hybridization