Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy4g2237 ATGAGATCTACGCATCCCCTCCACCACTATGTGTTCGCTGGTGACAGTTCCTTCGCGTATGCCCAGGCTGACGGCATAGCCCACAACCATTGTTTGATTTTTGCAGGTGTTGGCATTGGTGTAGGTTTTCTTTGTTTCTTTCTCTTGGGTTATAAACTATACCAATACATACAGAAAAAGAGAGAAAGGATTCGCAAAGAAAAGCTATTCAAACAGAATGGTGGCTACTTGTTACAAGAGAAAGTGTCATCATCACATGAAAATGGATCACAAAAGGTAATAATAAAGCTTTTCACAGCTGAGGAGCTTCAAAGAGCAACAGATAACTACAACTGGAGCAGGTTTCTTGGTCAAGGTGGATATGGAAAAGTCTACAAAGGAATGCTACCAGATGGAACCATAGTAGCTGTTAAGAGATCTAAGGAGATTGAGAGGAACCAGATTGAGACTTTCGTCAATGAAGTTGTCATTTTATCACAGATTAATCACAGGAACATTGTGAAGCTCTTGGGGTGCTGTCTTGAGACAGAAGCACCATTACTAGTCTATGAGTTCATTCCAAATGGAACACTTGCACAACATATTCATAGCAAACCCCATGAATCATCTTCACCACTTTCATGGGATAGCCGGCTTCGAATTGCATGCGAGGTAGCTGGAGCAGTGGCCTATATGCATTCTTCAGCTTCAATTCCCATCTTCCATAGAGATATCAAACCTACTAACATACTCTTAGATAGTAACTATAGTGCAAAAGTGTCTGATTTTGGAACATCAAGATCATTGCCACAAGACAAGACTCACTTGACAACACAAATAGGAGGAACTTTCGGATACATCGACCCTGAATATTTCCAATCTAGTCAATTTTCGGATAAGAGTGACGTATATAGTTTTGGAGTTGTGCTTGTCGAAATCATAACTGGGAAGAAGCCGATTTCGTTTATAGAAGAAGATGAGGGTCAGAATTTGATTGCTGAATTCATTTCTGTGATGAAGGAGAACAAAGTTTGTGATATCTTGGATCCCAAGGTATTGAAGGAAGCTAAGAATGATGAGATTATTGCAATTTCAAATCTTGCAATGAGGTGTTTGAGGCTAAATGGGAAAAAAAGGCCAACAATGAAAGAGGTTTCAGCTGAGTTGGAATCATTGAGGAAGGTACAAAGTTCCATGTTGGTTGATAACCATGATCATCATCATGATGAATCAACAAACAATGATGAAAAATTATCGCATAAACACAACAATAGTTTAGTACAAGAATATGCAGAGGAGAGCATTTTGCTGTCATTACAATTACAAATGGAGTCCTCATCCTTCTAA 1326 0.3914 MRSTHPLHHYVFAGDSSFAYAQADGIAHNHCLIFAGVGIGVGFLCFFLLGYKLYQYIQKKRERIRKEKLFKQNGGYLLQEKVSSSHENGSQKVIIKLFTAEELQRATDNYNWSRFLGQGGYGKVYKGMLPDGTIVAVKRSKEIERNQIETFVNEVVILSQINHRNIVKLLGCCLETEAPLLVYEFIPNGTLAQHIHSKPHESSSPLSWDSRLRIACEVAGAVAYMHSSASIPIFHRDIKPTNILLDSNYSAKVSDFGTSRSLPQDKTHLTTQIGGTFGYIDPEYFQSSQFSDKSDVYSFGVVLVEIITGKKPISFIEEDEGQNLIAEFISVMKENKVCDILDPKVLKEAKNDEIIAISNLAMRCLRLNGKKRPTMKEVSAELESLRKVQSSMLVDNHDHHHDESTNNDEKLSHKHNNSLVQEYAEESILLSLQLQMESSSF* 442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy4g2237 441 PANTHER LYSM TYPE RECEPTOR KINASE 25 413 - -
Ahy4g2237 441 ProSitePatterns Protein kinases ATP-binding region signature. 116 138 IPR017441 GO:0005524
Ahy4g2237 441 Gene3D Phosphorylase Kinase; domain 1 75 185 - -
Ahy4g2237 441 ProSiteProfiles Protein kinase domain profile. 110 385 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy4g2237 441 Pfam Protein kinase domain 112 379 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy4g2237 441 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 25 413 IPR045274 GO:0007166
Ahy4g2237 441 SUPERFAMILY Protein kinase-like (PK-like) 87 382 IPR011009 -
Ahy4g2237 441 CDD STKc_IRAK 116 385 - -
Ahy4g2237 441 Gene3D Transferase(Phosphotransferase) domain 1 186 411 - -
Ahy4g2237 441 ProSitePatterns Serine/Threonine protein kinases active-site signature. 233 245 IPR008271 GO:0004672|GO:0006468
Ahy4g2237 441 SMART serkin_6 110 385 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy4g2237 Ahy-Chr4 118576512 118578481 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy4g2237 33 386 Receptor kinase-like Gene Family AT1G16130 55.650 6.62e-142 422
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Ahy4g2237 Pkinase 1.20E-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy4g2237 - - adu:107485803 615.15
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy14g2548 14 132356657 132359515 Ahy4g2237 4 118576512 118578481 hybridization