Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy4g2219 ATGTCAATCTTCGATGGAGCATTCATGGACACAGAGCTCTCAAAGCGAACCTCAATCTTCGGCCTCCGCCTCTGGGTCGTCATCGGAATCCTCGTCGGAGTCCTCATCGTATTTACCCTCTTTCTTCTCTCCCTCTGCCTCACCTCCCGCCGCCACCGCCGCCGCCGAACCGTTGCCGGAAAATATTCATCCGCTGGAGCACCACCAGCCAAGGAGATCCAGGAGATAGTCCACCTCCCTGGACCACACATGCTCCGGCAGCCTCAGGCGCCGGCGCCGGTGCCAGAGATTCACGTTGACTTCGGAAAAGTGGAGCATCGTGTGGTGGTACACTCTGATAACAACAACAACAGCAACAATAGAGGAGTGTCTAGTGGTGAAAGTAAAGGAACTGTTAGTGGCTGTGAAACGACATCGTCGTTTGGGAGTGGGAGTGTCGTTTTGGGGGTTGGTGGTGGTGGTGTTGGTGTGGGACCTGAGGTTTCTCATCTTGGTTGGGGAAGATGGTACACTTTGAGAGAACTTGAAGCTGCTACTAATGGATTGTGTGAAGAGAATGTGATTGGTGAAGGTGGTTATGGCATTGTTTATTCTGGCGTTCTAAGTGATGGTACCAAAGTTGCTGTCAAGAATCTCTTGAATAACAAGGGCCAAGCTGAGAGAGAATTTAAAGTAGAGGTAGAAGCAATTGGTCGAGTTCGACACAAAAATCTTGTTAGGTTACTTGGCTATTGTGTTGAGGGGGCCTACAGGATGCTTGTGTATGAATATGTGAACAATGGGAATCTAGAACAATGGCTGCATGGGGATGTTGGACCTTTAAGTCCTTTGACATGGGATATACGCATGAACATCATCTTGGGAACTGCAAGAGGATTGGCATATCTTCATGAAGGTCTTGAACCAAAGGTTGTCCACCGGGATGTGAAATCGAGTAATATACTCATTGATCGCCAATGGAACTCTAAGGTTTCTGATTTCGGGCTCGCTAAACTTTTGTGTTCTGAGAATAGCTACGTCACAACTCGAGTGATGGGGACATTTGGTTATGTTGCACCGGAGTATGCCTGCACCGGAATGTTGACCGAAAAGAGTGACGTTTATAGCTTCGGGATACTCATCATGGAGATAATTACCGGGAGGAGTCCTGTCGATTATAGTAGACCACAAGGAGAGGTTAACTTAATAGATTGGTTGAAGACTATGGTTGGGAATAGAAAAGCTGAAGAGGTAGTTGATCCTAAGCTCCCTGAGATGCCAACCTCCAAGGCCCTTAAACGTGCTATATTGATTGCCCTTCGATGTGTTGACCCTGACGCGACAAAGAGGCCTAAAATGGGACATGTGATCCACATGCTTGAGGCAGATGATCTGTTATTCCAACATGAACGAAAAACTGAGGGAGAATCTTCGCGTTCGCAACGACAAGAGCGCAAGGACTCAGATTTAGATAAGAGGATACCAGATGGAGGGATCACTGATCAAAGTGAAGATGATACTAGTAGAAATCACCAGCAGCATACTAGGTGGAGATGA 1536 0.4746 MSIFDGAFMDTELSKRTSIFGLRLWVVIGILVGVLIVFTLFLLSLCLTSRRHRRRRTVAGKYSSAGAPPAKEIQEIVHLPGPHMLRQPQAPAPVPEIHVDFGKVEHRVVVHSDNNNNSNNRGVSSGESKGTVSGCETTSSFGSGSVVLGVGGGGVGVGPEVSHLGWGRWYTLRELEAATNGLCEENVIGEGGYGIVYSGVLSDGTKVAVKNLLNNKGQAEREFKVEVEAIGRVRHKNLVRLLGYCVEGAYRMLVYEYVNNGNLEQWLHGDVGPLSPLTWDIRMNIILGTARGLAYLHEGLEPKVVHRDVKSSNILIDRQWNSKVSDFGLAKLLCSENSYVTTRVMGTFGYVAPEYACTGMLTEKSDVYSFGILIMEIITGRSPVDYSRPQGEVNLIDWLKTMVGNRKAEEVVDPKLPEMPTSKALKRAILIALRCVDPDATKRPKMGHVIHMLEADDLLFQHERKTEGESSRSQRQERKDSDLDKRIPDGGITDQSEDDTSRNHQQHTRWR* 512
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy4g2219 511 MobiDBLite consensus disorder prediction 464 511 - -
Ahy4g2219 511 SUPERFAMILY Protein kinase-like (PK-like) 161 454 IPR011009 -
Ahy4g2219 511 MobiDBLite consensus disorder prediction 112 136 - -
Ahy4g2219 511 PANTHER OS01G0323000 PROTEIN 1 501 - -
Ahy4g2219 511 ProSiteProfiles Protein kinase domain profile. 182 459 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy4g2219 511 SMART serkin_6 182 460 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy4g2219 511 ProSitePatterns Serine/Threonine protein kinases active-site signature. 304 316 IPR008271 GO:0004672|GO:0006468
Ahy4g2219 511 Pfam Protein kinase domain 185 451 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy4g2219 511 Gene3D Phosphorylase Kinase; domain 1 166 257 - -
Ahy4g2219 511 PANTHER BRASSINOSTEROID INSENSITIVE 1-ASSOCIATED RECEPTOR KINASE 1 501 - -
Ahy4g2219 511 Gene3D Transferase(Phosphotransferase) domain 1 258 471 - -
Ahy4g2219 511 CDD STKc_IRAK 188 454 - -
Ahy4g2219 511 ProSitePatterns Protein kinases ATP-binding region signature. 188 210 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy4g2219 Ahy-Chr4 118135480 118140156 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy4g2219 169 510 Trihelix Transcription Factor Family AT5G38560 45.042 1.08e-94 300
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-V Ahy4g2219 Pkinase 2.60E-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy4g2219 - - gmx:100800724 728.013
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy14g2524 14 131128954 131133592 Ahy4g2219 4 118135480 118140156 hybridization
Ahy4g2219 4 118135480 118140156 Ahy12g0169 12 2928004 2931256 PCT
Ahy4g2219 4 118135480 118140156 Ahy2g0200 2 2333646 2336863 PCT
Ahy12g0169 12 2928004 2931256 Ahy4g2219 4 118135480 118140156 PCT
Ahy2g0200 2 2333646 2336863 Ahy4g2219 4 118135480 118140156 PCT