Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy4g2208 ATGGCATCCGCCTCTTCTTCCGCATCAATCCCACCACCAAGATCATGCACCTATGACGTGTTCTTGAGTTTCAGGGGAGAAGACACTCGCAAAGGTTTCACTGGCCATCTCTTTGCGGCCCTCAACAGGAAGAGAATCACAACCTACAAAGATGACAAAAACCTTCGCAAAGGCGATGTTATTTCAAAAGAACTCCTCAAAGCAATTGAAGAATCGATGTTTGCAGTCATTGTTTTTTCACCGAACTACGCTTACTCCAGTTGGTGCTTGGATGAGCTCCAAAAAATCATGGAGTGCAACAAGAAGGTGGGGCAACACATCGTGCCGGTGTTCTACGGTGTGGAGCCTTGTGATGTGAGGCACCAAAGAGGAACCTTTGAGGAAGCTTTCAAGAAACACGAACAGAGACATGACAGTGAGAAGGTCAAGAGATGGAGAGATGCGCTAAGACAAGTTGCTGCTCTTTCTGGTTGGACCTCCAAAAATGAGGACGAAGCAGTACTTGTGGAAAATATTGCTCAGCATATATTTGAAATATTGATTACTAAGTTGCCATCTTCAATGAAGAATCTTGTGGGGATTGAATCAAGAGTGAAACAAGTGATTACTCTCATAGGCCTTGGATTGAATGATGTTCGCTTTATAGGCATATGGGGAATGGGCGGCATGGGTAAGACCACTATTGCTAGAGCAGTCTTTGAAATCATTCGAAGCAGATTTGAAGTTACTTGCTTTCTTGCCGACGTAAGAGAACACTGCGAGAAAAAAGATATTACTCACATACAAAAGCAACTTCTCGATCAAATGAAAATAAATTCAAATTCTGTTCATAACAAGTATGATGGGAGGACAATAATTCAAAACTATTTACGTCTCAAAAGGGTACTTCTTGTTCTTGATGATGTAAATCATGGAAAACAATTAGAATATTTGGCTGGGGAGCAAGCTTGGTTTGGTCCTGGAAGCAGAATAATAATCACAACTAGAGACTTAAAGGTGCTAAAGGAACAAGAGGTGCATGAAACTTATAAGGTTGAAGAGTTAGTGGAAAGTGAAGCCCTTAACCTCTTTTGTCTGAAAGCCTTTAAACAGCAGGAGCCTACAGAAGGGTTTTTGGATTTGTCTGAAGAAGTGGTCAAGTACAGTGGTGGTCTTCCATTGGCACTTAAAGTATTGGGTTCCTATCTTTATGGTAGACCTATTGCGGTTTGGCATAGTGCTATAGAAAAAATAAAGAAGTCTTCACATTCTGAAATTATTGATACTTTGAAAATAAGCTATGAGGGTTTAGATGATATGGAAAAGAATATTTTTCTAGATATTGCTTGTTTTTTTAAAGGAGATCCGCAATATTATGTAAGAAAGATATTAGAAGAATGTGGTTATCAGGCTAAAATTGGTCTTGATAGTTTGATTAACAGATCATTGGTAACTATAAATAAATATGATGAATTGGGGATGCATGATCTGCTTGAAGAAATGGGCAAACAAATTGTAATTCAGGAATCTCCGAATGATGCTTGTAACCGTAGCAGATTGTGGTGTTCGGAGGATGTTGAATTTGTACTTGCTCAAAAGGAGAAAACTAAAGCAACTCATGGCATCGTTCTACCTATGGATTATTGGTATAGCGAGACTAAAGTGAATTGGAGAGATTTATCTTTCTCAAAAATGTGCCAGTTAAAGCTTCTCATTTTAGATGGCGTGAAAGCTCCCATTCTCTGCGATATTCCTTGTACATTAAAGGTATTTCGCTGGAGACATTGTCCACTGAAAACTCTGCCCCTTACAGATCATCAACGCTATGAGCTTGTTGAAATTAATCTGTCTCATAGCCAAATTGTAGAGTTATGGGATGGAAAGAAGGTTCTAGAAAAGTTAGAGCACTTGAATCTGTCAGAGTGCAAGCAGCTGAAGCAAACACCAGATCTTTCTGGGGCTCCCAATCTTAAAACACTTGATCTTGGTGGATGTGAGAGACTTGAAACACTTGGAGATAAATTGGAGATGAGTTCACTCGAGATACTATATCTATCTTACTGCAGTAGTTTGAGAAGACTGCCAGATCTTTCTGGGGCTCCCAATCTTAAAGAAGTTCATTTTGATGGATGTGAGGAGCTGAATTATATTCACCTGTCACTCGCACACCACAAAAGAATTTTTTTTTTGGATTTAAGTGGATGCACGAGTCTTGAAACACTTGGAGATAAATTGGAGATGAGTTCACTCAGGATGCTAGATCTAAACTCCTGCAGTAGTTTGAGAAGACTGCCAGAATTTGGAGAATGCATGAAACAGTTATCGATTCTTGATCTGAGAGATACAGGTATAGAAGAGCTACCCCCAACGCTTGGAAATTTGGCTGGCGTGTCTGAGTTGAACTTAAGTGGATGCGACAAGATTACTGGTCTTTCCTCCGATATTGGCTCATCTAGAGAAGAGGCAACCCTTTCCTATGATATTGGCCAGTTGGCATCGTTGACGGATTTGGATTTATCTGAGAGCAGTTTTTTAAGAGTTCCAGTAAGTATCCATGAACTCCCCAGACTTACACGTCTGGCCTTATCTGATTGCTCTAAATTGAAGGTTTTACCAGAGCTTCCATCAAGTCTAAGAAAATTAGATGCACAGGGTTGTGATTCACTGGATGCATCGAATGTTGATGATGTTATATCAAAGGCGTGTTGTGGCTTTGCAGAATCAGCTAGCCAAGATCGTCAAGACTTCTTGCAAATGTTGATCACACGGGAGGAAATTCCAGCATGGTTTGAGCATCAGGAAGAAGATGACGGAGTATCAGTGTCATTCCCGCAGAATTGCCCTTCAATTGAAACCATCGCACTTGCTCTCTGTTTCCTAATTGAAATTGAAGAAGATATTGACTCAATAAAGCCATCGGTGATCTGCAACGGTAAAGAATTCATCAACGCGAGTTTACACGTGGCGTCTAGTGGAGATTCTTTGTTCATTGTGTGCGTGAACGGTTACTATTTTAGTAAGCGCCAACACAATCGCTTCCAATTGTTATTTCCAGATGATGACGATCTTGATGATGATATCCGAGTAAAGAGATGCGGAGCACGTTGGGTGTGCAAGCAAGACATTCAAGATTTCAAGAAAAGAAAATCCCAAACAGGGAAAAGAAAAGCAACTCTTGAACTGAACATGGACATGATTTTACATTCTTCAGCTTCTACAAATAAGATGCTCGTGGTTGACTCTCCAGTCTATGAACAAGAGATAGAGCCAGCCGCCACAGCGGAGGGCGCTATTAGCCATTTGGCATCTGGCAAAAGCTCTGACCCACCTCAACTCTTGCCTCTCTTCCCTTTGCATCCCAGTTCTCATAGCTCATGA 3357 0.4075 MASASSSASIPPPRSCTYDVFLSFRGEDTRKGFTGHLFAALNRKRITTYKDDKNLRKGDVISKELLKAIEESMFAVIVFSPNYAYSSWCLDELQKIMECNKKVGQHIVPVFYGVEPCDVRHQRGTFEEAFKKHEQRHDSEKVKRWRDALRQVAALSGWTSKNEDEAVLVENIAQHIFEILITKLPSSMKNLVGIESRVKQVITLIGLGLNDVRFIGIWGMGGMGKTTIARAVFEIIRSRFEVTCFLADVREHCEKKDITHIQKQLLDQMKINSNSVHNKYDGRTIIQNYLRLKRVLLVLDDVNHGKQLEYLAGEQAWFGPGSRIIITTRDLKVLKEQEVHETYKVEELVESEALNLFCLKAFKQQEPTEGFLDLSEEVVKYSGGLPLALKVLGSYLYGRPIAVWHSAIEKIKKSSHSEIIDTLKISYEGLDDMEKNIFLDIACFFKGDPQYYVRKILEECGYQAKIGLDSLINRSLVTINKYDELGMHDLLEEMGKQIVIQESPNDACNRSRLWCSEDVEFVLAQKEKTKATHGIVLPMDYWYSETKVNWRDLSFSKMCQLKLLILDGVKAPILCDIPCTLKVFRWRHCPLKTLPLTDHQRYELVEINLSHSQIVELWDGKKVLEKLEHLNLSECKQLKQTPDLSGAPNLKTLDLGGCERLETLGDKLEMSSLEILYLSYCSSLRRLPDLSGAPNLKEVHFDGCEELNYIHLSLAHHKRIFFLDLSGCTSLETLGDKLEMSSLRMLDLNSCSSLRRLPEFGECMKQLSILDLRDTGIEELPPTLGNLAGVSELNLSGCDKITGLSSDIGSSREEATLSYDIGQLASLTDLDLSESSFLRVPVSIHELPRLTRLALSDCSKLKVLPELPSSLRKLDAQGCDSLDASNVDDVISKACCGFAESASQDRQDFLQMLITREEIPAWFEHQEEDDGVSVSFPQNCPSIETIALALCFLIEIEEDIDSIKPSVICNGKEFINASLHVASSGDSLFIVCVNGYYFSKRQHNRFQLLFPDDDDLDDDIRVKRCGARWVCKQDIQDFKKRKSQTGKRKATLELNMDMILHSSASTNKMLVVDSPVYEQEIEPAATAEGAISHLASGKSSDPPQLLPLFPLHPSSHSS* 1119
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy4g2208 1118 Gene3D Ribonuclease Inhibitor 546 716 IPR032675 -
Ahy4g2208 1118 SUPERFAMILY "Winged helix" DNA-binding domain 417 523 IPR036390 -
Ahy4g2208 1118 MobiDBLite consensus disorder prediction 1094 1118 - -
Ahy4g2208 1118 PRINTS Disease resistance protein signature 214 229 - -
Ahy4g2208 1118 PRINTS Disease resistance protein signature 382 396 - -
Ahy4g2208 1118 PRINTS Disease resistance protein signature 289 303 - -
Ahy4g2208 1118 PRINTS Disease resistance protein signature 738 754 - -
Ahy4g2208 1118 Pfam C-JID domain 916 1035 IPR045344 -
Ahy4g2208 1118 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 179 441 IPR027417 -
Ahy4g2208 1118 ProSiteProfiles TIR domain profile. 16 180 IPR000157 GO:0007165
Ahy4g2208 1118 SUPERFAMILY L domain-like 552 881 - -
Ahy4g2208 1118 Gene3D - 15 181 IPR035897 -
Ahy4g2208 1118 Pfam NB-ARC domain 211 422 IPR002182 GO:0043531
Ahy4g2208 1118 Gene3D Ribonuclease Inhibitor 717 894 IPR032675 -
Ahy4g2208 1118 Gene3D - 347 431 IPR042197 -
Ahy4g2208 1118 PANTHER DISEASE RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 16 625 - -
Ahy4g2208 1118 SMART till_3 17 155 IPR000157 GO:0007165
Ahy4g2208 1118 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 16 625 IPR044974 GO:0006952
Ahy4g2208 1118 Gene3D - 182 344 IPR027417 -
Ahy4g2208 1118 Pfam TIR domain 18 191 IPR000157 GO:0007165
Ahy4g2208 1118 SUPERFAMILY Toll/Interleukin receptor TIR domain 13 158 IPR035897 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy4g2208 Ahy-Chr4 117897273 117902822 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy4g2208 11 793 WRKY Transcription Factor Family AT4G12020 30.361 7.61e-96 334
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy4g2208 - - ahf:112797493 1623.99