Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy4g2200 ATGGAAACGCATAGAGCCAAACTATGCTGCCAATGGTTCCCATGCAGACCACGTTCTTCATGCAGAAGCAAGAACAAACTGAAAGAATCTCTCATGGATTCTGATGATTCTACAGTTGAGGTGCCGTTCTCAAGCACGATCAAGGTAGTAACCGCTTTTGGTTACTGTCTTGAAGGGGATACCGAGGAGGAGGAGAGGATGATGGATATCAAGAAAATAAAAAGAGACTGTTTTATTCAAAATAAACAGTGTGATTTCAACGATGATGAACTTGAAGTTGTTGATATTCTGTTTAACCTCCCCAGAAACTTCTTAGAGAGGGTTAATTTAGAGACTTCTAACAGCGTTGTGAATTCAAGCTCCAGTGCCGATCAAGAACGGGTTTCAAAGGAGGCTTCCAAGAAAGAAACAAAGAAACCAGTCAACCAAGAAGGAAATAGCCCCAGCGCCGTGAATTCAGGGCCAAGTGCTGATCAAGAACGGGTTTCAAACATGAATTCCAACAACACCGTTAACTTAGTGGATTCTCGGCTCAACCAAGAACCAGTCAACCAAGAACCCTCTGAATTGCCACAAAATTTCAAGAACTTGATAAGTGATATGGGTGGCAGCAGGATCACTCTGCTTATTGAAAAAACTCTCTATGAATCGGATCTGAATCCACAACAAAACCGGCTTTCGATACCGTCACGGAAGGTCAAGGACAAAGATTTCTTGCTTCCCACGGAACTTGAAACTCTGGAGGAGAAAAAGGGAATAAAAGTGAAACTGATCCAACCGTCGCTGGAAATTACCGAGTTGACTTTGATTAAATGGTTCATGCACAAGGGTCCAAAGTCAGAGAAAGTAAGCACTTCCTATATTCTGAGGTCAAATTGGGTCCAAGTTGCAAAGGCTAACAACCTAGAAAAGAATGATGTTGTTCAAGTTTGGTCATTTCGAGTTGAAGAGAAATTATGCATGGCAATTGTCAAGCTTTGA 981 0.419 METHRAKLCCQWFPCRPRSSCRSKNKLKESLMDSDDSTVEVPFSSTIKVVTAFGYCLEGDTEEEERMMDIKKIKRDCFIQNKQCDFNDDELEVVDILFNLPRNFLERVNLETSNSVVNSSSSADQERVSKEASKKETKKPVNQEGNSPSAVNSGPSADQERVSNMNSNNTVNLVDSRLNQEPVNQEPSELPQNFKNLISDMGGSRITLLIEKTLYESDLNPQQNRLSIPSRKVKDKDFLLPTELETLEEKKGIKVKLIQPSLEITELTLIKWFMHKGPKSEKVSTSYILRSNWVQVAKANNLEKNDVVQVWSFRVEEKLCMAIVKL* 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy4g2200 326 MobiDBLite consensus disorder prediction 127 141 - -
Ahy4g2200 326 Pfam B3 domain-containing protein At2g31720-like 194 298 IPR005508 GO:0003677
Ahy4g2200 326 MobiDBLite consensus disorder prediction 142 163 - -
Ahy4g2200 326 CDD B3_DNA 209 325 IPR003340 GO:0003677
Ahy4g2200 326 SUPERFAMILY DNA-binding pseudobarrel domain 208 322 IPR015300 -
Ahy4g2200 326 PANTHER DOMAIN PROTEIN, PUTATIVE (DUF313)-RELATED 107 326 - -
Ahy4g2200 326 PANTHER B3 DOMAIN PLANT PROTEIN-RELATED 107 326 IPR005508 GO:0003677
Ahy4g2200 326 MobiDBLite consensus disorder prediction 115 163 - -
Ahy4g2200 326 Gene3D - 199 325 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy4g2200 Ahy-Chr4 117585072 117586052 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy4g2200 189 323 B3 DNA Binding Superfamily AT1G05930 27.465 1.33e-10 59.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy4g2200 - - adu:110280249 561.222