Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy4g2193 ATGATGTGTAGTGGTGAGCCTTTGGATTTGTATAAGCTATTCATGGTGGTGAAGGAGAAAGGTGGCTATGATGCTGTTTGTAAGAATATGCTGTGGGATTTGGTTGCGGAAGAATATGGTTTAGGTTTAAATGTTGGTTCATCTATTGAACTTGTTTATAGTAAGCACTTGAGTACACTAGAGACATGGCTGAAGAATGTTGCTGATAGTAAGTTCCCTGAGTGTGGTTTAATGGATGATAGGGTTAGTTTTGGTAAGAAGTTGATGGAGGTGCAGGCTGATTTCTTGTTAGATGTTTATAGCGAGGAAGGTGCAGGGGATAAAATTAAGACAGTATGTGATTTCGCAGATGGAAGGAAGTTGTGTGGAACTAATAGGGTTAGGGGATTGAATCCTGAGCTCAGCGGTGCAAAGAAAATTGTTGATTTGAATGCACTGGACCATAAGATAAATGGGCCTAGTATTGGAAGCTTTTGCAGCAATAACTTTTCAAATAATTCAAGTGATATACAGAACCATTTGAATGAAATTAAGACATCAACAGTGGACATATCTGATGAAGCAAACATAATGCCTACATTGTCGGAAGAAGGTGATAGTTGTGATAAAAATGATGGTCATGATGACGACGATGACGACGATGATGATGTGATGGTATTGGATCCATCCACTGTTAATAAAGAGAGCTTTGGTAGAAAGAGGAAGAGAGAGTCTATGTCTGAAATGCTAAGCTGGCTTACTGGTATTGCTAAGAATCCTTGTGATCCTGCAGTTGGTTCAATGCCTGAAAAGTCAAAGTGGAAGTCTTATGGTAGTGAGGAGATCTGGAAGCAGGTTTTGCTGTTTCGGCAAGCCACCTATTTTAGCAGTGATCACGTCAGTTGGCAGAAGATGCATCCTTGCATGTATGATGATCAGGTTGGGGCAAACTACAACCTTAGAGAGAGGTTGAAATCTGACAAGAATTTAACTTGTGGTGTCTCTTCAAATATGGGAGGAATACAGGGAGGTTCCGAGAGAAACCCAAGTCCTCATTCAGAAGTGGAGAAACTGTTACTTGACCAATGTAGCATGGTGCCCATTCCTGTTGGGCCATCCCATCAAGCTGAAGTGCCTGAATGGACTGGTGTGGCAATTGAAAGTGATTCCAAGTGGTTGGGAAGCCAAATATGGCCATCAGCAGAGATAAAGTCCAAAGTCATAGAAAGAGATCCTATTGGAGCAGGAAGGAAAGATTCATGTGGCTGTGAAGTACAAGGTTCTGTTGAGTGTGTCCGGTTCCACATTGCTCAGAAAAGGGCTAAAGTTAAGTTGGAATTGGGTGTGGCTTTTTATCTGTGGAATTTACACAAGACAGGCGAAGATGTTAGGCGATTGTGGACAGAAGACGATGAGAAGAAGTTCAAGGATGTGGTGAAATCAAACCCTCCTTCACTTGAAAAATGTTTTTGGGATCAAATTTTCAAATCATTTCCTACAAAGAGCAGGGAAGATTTAGTAAGTTACTACTTCAATGTCTTTATTTTGCAGCGCAGAGGATACCAAAATAGGAATACTCCGGATGACATTGACAGTGACGATGATGAATCAGAATATGGTCCATTGAAGAATGCTTTTGGACATCAAACACATAGGTCGCGCAACATCACCTTATTGTCTCCCAAAAAGCCCAAGAAAACGGAACATAGCAAGTGA 1695 0.4112 MMCSGEPLDLYKLFMVVKEKGGYDAVCKNMLWDLVAEEYGLGLNVGSSIELVYSKHLSTLETWLKNVADSKFPECGLMDDRVSFGKKLMEVQADFLLDVYSEEGAGDKIKTVCDFADGRKLCGTNRVRGLNPELSGAKKIVDLNALDHKINGPSIGSFCSNNFSNNSSDIQNHLNEIKTSTVDISDEANIMPTLSEEGDSCDKNDGHDDDDDDDDDVMVLDPSTVNKESFGRKRKRESMSEMLSWLTGIAKNPCDPAVGSMPEKSKWKSYGSEEIWKQVLLFRQATYFSSDHVSWQKMHPCMYDDQVGANYNLRERLKSDKNLTCGVSSNMGGIQGGSERNPSPHSEVEKLLLDQCSMVPIPVGPSHQAEVPEWTGVAIESDSKWLGSQIWPSAEIKSKVIERDPIGAGRKDSCGCEVQGSVECVRFHIAQKRAKVKLELGVAFYLWNLHKTGEDVRRLWTEDDEKKFKDVVKSNPPSLEKCFWDQIFKSFPTKSREDLVSYYFNVFILQRRGYQNRNTPDDIDSDDDESEYGPLKNAFGHQTHRSRNITLLSPKKPKKTEHSK* 565
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy4g2193 564 SUPERFAMILY ARID-like 3 73 IPR036431 GO:0003677
Ahy4g2193 564 Pfam Myb-like DNA-binding domain 459 506 IPR001005 -
Ahy4g2193 564 SMART bright_3 2 66 IPR001606 GO:0003677
Ahy4g2193 564 PANTHER AT-RICH INTERACTIVE DOMAIN-CONTAINING PROTEIN 2 1 560 - -
Ahy4g2193 564 MobiDBLite consensus disorder prediction 518 564 - -
Ahy4g2193 564 MobiDBLite consensus disorder prediction 203 217 - -
Ahy4g2193 564 CDD SANT 460 507 IPR001005 -
Ahy4g2193 564 PANTHER AT-RICH INTERACTIVE DOMAIN-CONTAINING PROTEIN 1 1 560 - -
Ahy4g2193 564 SMART ELM2_2 361 411 IPR000949 -
Ahy4g2193 564 CDD ARID 4 61 - -
Ahy4g2193 564 SMART sant 456 509 IPR001005 -
Ahy4g2193 564 MobiDBLite consensus disorder prediction 193 217 - -
Ahy4g2193 564 ProSiteProfiles ARID domain profile. 1 65 IPR001606 GO:0003677
Ahy4g2193 564 Gene3D - 1 73 IPR036431 GO:0003677
Ahy4g2193 564 Pfam ARID/BRIGHT DNA binding domain 4 60 IPR001606 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy4g2193 Ahy-Chr4 117340210 117345281 Dispersed/Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR ARID Ahy4g2193 ARID 8.50E-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy4g2193 - - adu:107485899 1094.72
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy14g2481 14 130088182 130093238 Ahy4g2193 4 117340210 117345281 hybridization