Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy4g2178 ATGAATTCAGAGGAAGCTGCACAAATTCCCAGAAGAACTACAAGGTCTTTAGCTTCATCTTCTGCGTCGACTTCTAATAATGCATCTTCTGCAAAAGTAAATAGCCTTGAACCTCTAACAGTCAATGACCTTTTAGTTGGAGGAGACCCTATTAGCCTAGATGAATTGTTTTCTAATTTCCCCGGTAGAAGTAGCCAGATTCTCGAGATTGTAAGCCTTTTGGGGCCATTGAACACTCCAATGCTTCCTTTGTTTGTGTATGGTGGTGCTTCCACTGGAAAAACCAGTATCATTCTTCAATTATTCCGGCATCTTAACAGGCCTCTTGTTTATTCTAGCTGCAGGACGTGTTATAATCAGCGTATCTTGTTTGAATCTATTCTAAATCAGTTGCATCTCCATAGAAAAAGTTCTGCCAATGGCTATTCAAATGCAAAGCGCTGTGAGAGACCATCGGATTTTATTAATTTTCTTAAGGAAGCATTGACCGATGCCATAAACAATCTGAAGGAGAAGTCGGAGAAGTTGATATCAGGCAAGACAATGGCACAAGGGGGGATTGGAAACATGATCTACTTGGTATTTGACAATTTTCAGCTTGTTAGAGAGTGGGATAAGAGCTCTACTTTATTACCCTTTCTGTTTAATCTCTATGATCTGCTGAAGATTCCTGAGATGCTGATCTTCGCAAAATATTGTCGAGAAACCAAGCAGACTCGAAGCTGTATTCTTCATTCTTGGACTTTAAGGTCTTTCTTTAGGGTTACTAGGCAGGTTGATGAATTGTCCACTGCCTTCAAACCACTATATGAAAAATATTGTGAACCTTTACGCGATAAAAGAGTCTTTCCTAATGGAGACAAAGACAAAGACATGAAGAGAAAGTTATTTAGTCATATCAATCCTCACATCACATCCTCTCTGAATGAGATATTTAAAGTTTCATCTCATCCTTCAGCTGAAGTTGAGAACTCCAAAGAGGCAAATCTGAAGGTGAATCAAAGGAAACTGGAGCGACGTGAAGAAATTGCCAAGCTAGATTTTCACATGTCTACTAGTGCAAAGTATCTTCTTATTTCAGCATTTCTTGCTTCCAGAAATCCAGCTACTCTTGATGCTTCACTTTTTGATTCCAAAGGAGGTTCTGATAATCGAAAGCGAAAGAGGAAACCCTCTGAGAAGGTGCCTGAAAGAAAGGAAAGTTTAGAAGAGGAGTTACTAATGAAAGGACCTGGAAGTTTCCCACTGGAGAGGTTGTTAGCCATCTTTCAGTGTATTGTATCGGTCGCAGAAGATTCGTCGGATGAGGACAAACAAAGCGGCGAGCTGATGTCTGATGTTTTGTTGCAGCTATCCAGTCTCTGCAATGCTAAATTTATATTTAAAGGAAGAAGCTGTCCAATTGAAGGCTCAGTTCGGTATCGGTCAACTGTATCAGAAGACTTGGCTTTGAAGGTTGCAAGGAGCCTCAAGTTCCCTTTATCAAGTTATTTGTATAAAAGAACCTAG 1509 0.3996 MNSEEAAQIPRRTTRSLASSSASTSNNASSAKVNSLEPLTVNDLLVGGDPISLDELFSNFPGRSSQILEIVSLLGPLNTPMLPLFVYGGASTGKTSIILQLFRHLNRPLVYSSCRTCYNQRILFESILNQLHLHRKSSANGYSNAKRCERPSDFINFLKEALTDAINNLKEKSEKLISGKTMAQGGIGNMIYLVFDNFQLVREWDKSSTLLPFLFNLYDLLKIPEMLIFAKYCRETKQTRSCILHSWTLRSFFRVTRQVDELSTAFKPLYEKYCEPLRDKRVFPNGDKDKDMKRKLFSHINPHITSSLNEIFKVSSHPSAEVENSKEANLKVNQRKLERREEIAKLDFHMSTSAKYLLISAFLASRNPATLDASLFDSKGGSDNRKRKRKPSEKVPERKESLEEELLMKGPGSFPLERLLAIFQCIVSVAEDSSDEDKQSGELMSDVLLQLSSLCNAKFIFKGRSCPIEGSVRYRSTVSEDLALKVARSLKFPLSSYLYKRT* 503
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy4g2178 502 Gene3D - 60 245 IPR027417 -
Ahy4g2178 502 Pfam Origin recognition complex (ORC) subunit 5 C-terminus 249 498 IPR020796 GO:0000808|GO:0005634|GO:0006260
Ahy4g2178 502 MobiDBLite consensus disorder prediction 379 404 - -
Ahy4g2178 502 PANTHER ORIGIN RECOGNITION COMPLEX SUBUNIT 5 249 500 IPR020796 GO:0000808|GO:0005634|GO:0006260
Ahy4g2178 502 PANTHER ORIGIN RECOGNITION COMPLEX SUBUNIT 5 52 228 IPR020796 GO:0000808|GO:0005634|GO:0006260
Ahy4g2178 502 Coils Coil 155 175 - -
Ahy4g2178 502 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 53 229 IPR027417 -
Ahy4g2178 502 MobiDBLite consensus disorder prediction 374 404 - -
Ahy4g2178 502 Pfam AAA ATPase domain 59 217 IPR041664 -
Ahy4g2178 502 MobiDBLite consensus disorder prediction 1 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy4g2178 Ahy-Chr4 116939621 116942334 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy4g2178 4 501 Core DNA Replication Machinery Family AT4G29910 52.941 0.0 535
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy4g2178 K02607 - gmx:100782175 682.945
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy14g2458 14 129462178 129463690 Ahy4g2178 4 116939621 116942334 hybridization