Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy4g2166 ATGTCTATGTATGTTGAAATTCCTATCTTAGACATATCACAACCTTTGCAACCTTCTTCACTATCCTCTCTCACCAAAGCAGCCAAAGAGTGGGGATTCTTCCACATCATCAACCATGGAATCTCCAAAGATTTTTGCATCCAACTCCAATCACTATCCAAACAATTCTTCAGCCTCCCTTATGATACAAAACTCAAGCTTGGCCCTTTTTCATCTCTCAAATCTTACACTCCTCATTTCATTGCATCTCCTTTCTTTGAGAGCCTCAGAGTTAATGGACCTAACTTCTATCTTTCAGCTAAGACTTCTGAAGATCTACTCTTTCATAAACAAGATTCCAAATTAAGTGAAATGCTGCAAGAATATGGTAATAAGATGGAAGAATTGTCAAAGAAAATCCTAAGGGCAGTGTTGATGAGTTTAGGGGAAGGCATTGAGAAGAAGTTTCTTGAATCTGAATTCAGCAAGTGCCATGGTTACTTGAGAATAAACAATTATTCATCATCACAAGTAGAAAATAATAATATTATTATGGAAGATGATGATGATGAATTATTAGTTGAGGGTCTTGGAATGCACACTGACATGAGTTGCATAACAATCCTATACCAAGATGAAATTGGAGGGCTTCAAGTGAAATCGAAAAATAATAATAATAAGGAAGGAGAAGGAAGAGGAAAATGGATAGACATAAAACCCTCAGAAGGAACCCTAGTTGTGAACATTGGAGACATGTTACAAGCTTGGAGCAATGATAAATTAAGATCTTCAGAGCATAGAGTTGTTTTGAGGAAGCCATCAATAGTGAAGAAGAATAATAGTAGGTTTTCATTGGCATTTTTTTGGTGCTTTGAGGATGAAAAGATTATTTTGGCTCCTGATGAAGTTGTTGGTGACGGGAACAAGAGATTTTACAAGCCATTTTTGTGCTTGGATTATTTGAAGTTTAGAGAGAATAATGTGAGAGGAAAGTTTGAAAAGGTTGGTTATACCGTCAAGGATTTTGCTGGGATTAAAGCACAGCTTTGA 1029 0.3635 MSMYVEIPILDISQPLQPSSLSSLTKAAKEWGFFHIINHGISKDFCIQLQSLSKQFFSLPYDTKLKLGPFSSLKSYTPHFIASPFFESLRVNGPNFYLSAKTSEDLLFHKQDSKLSEMLQEYGNKMEELSKKILRAVLMSLGEGIEKKFLESEFSKCHGYLRINNYSSSQVENNNIIMEDDDDELLVEGLGMHTDMSCITILYQDEIGGLQVKSKNNNNKEGEGRGKWIDIKPSEGTLVVNIGDMLQAWSNDKLRSSEHRVVLRKPSIVKKNNSRFSLAFFWCFEDEKIILAPDEVVGDGNKRFYKPFLCLDYLKFRENNVRGKFEKVGYTVKDFAGIKAQL* 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy4g2166 342 PANTHER GIBBERELLIN 2-BETA-DIOXYGENASE 3 335 - -
Ahy4g2166 342 SUPERFAMILY Clavaminate synthase-like 5 322 - -
Ahy4g2166 342 Pfam 2OG-Fe(II) oxygenase superfamily 164 281 IPR044861 -
Ahy4g2166 342 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 157 285 IPR005123 -
Ahy4g2166 342 Pfam non-haem dioxygenase in morphine synthesis N-terminal 7 72 IPR026992 -
Ahy4g2166 342 PRINTS Isopenicillin N synthase signature 24 41 - -
Ahy4g2166 342 PRINTS Isopenicillin N synthase signature 193 214 - -
Ahy4g2166 342 Gene3D - 2 322 IPR027443 -
Ahy4g2166 342 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 3 335 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy4g2166 Ahy-Chr4 116709800 116711750 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy4g2166 5 306 Glycosyltransferase AT5G59530 26.349 1.26e-18 84.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy4g2166 - - aip:107638064 607.446
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy14g2430 14 128799377 128801436 Ahy4g2166 4 116709800 116711750 hybridization
Ahy4g2166 4 116709800 116711750 Ahy12g0054 12 1516424 1518376 PCT
Ahy4g2166 4 116709800 116711750 Ahy2g0017 2 139759 141477 PCT
Ahy12g0054 12 1516424 1518376 Ahy4g2166 4 116709800 116711750 PCT
Ahy2g0017 2 139759 141477 Ahy4g2166 4 116709800 116711750 PCT