LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Ahy4g2162	ATGGCAACTTCTTCCTCAGTTCGGCCCAAGCCGTTTCCTTCAAATGCGCCAAATGTAGATCCAGACTGCATTTTTGGTTGGTCAAAATTATCCTTCATTTCCTTTTCACATTTGTTTTATCAGCTACTTTGGATCACATTGGTGGCATCCTGCACTGCTCTATTAATTCAGTCCATGGCAGCCAATCTTGGGGTTGTCACTGGAAAGCACTTAGCAGAGCATTGTAGAAATGAATATCCTTGGGCTACCAACTTTATTCTTTGGTTTATTGCTGAAATTGCCATAGTCGCCTGTAACATTCCTGAAGTAATTGGGACAGCCTTTGCATTGAGCATGCTTTTCAACATACCTGTTTGGATTGGTGTTCTTCTGACAGGACTCAGTACATTGATCCTCTTAGCTTTACAGCAATATGGGGTTAGAAAACTTGAATTCTTGATCGCATTTCTAGTATTTACAATTGCTGCATGCTTTTTTGCTGAGCTTGGATATGCAAAACCTATTGCTAAAGAAGTTCTGAAGGGTCTTTTTGTGCCAGAACTAAAAGGAAGCGGTGCTACTGGTCTCGCGATTTCACTCCTAGGGGCTATGGTTATGCCATTATCCAGTATACCACTCACTGTATGA	627	0.4147	MATSSSVRPKPFPSNAPNVDPDCIFGWSKLSFISFSHLFYQLLWITLVASCTALLIQSMAANLGVVTGKHLAEHCRNEYPWATNFILWFIAEIAIVACNIPEVIGTAFALSMLFNIPVWIGVLLTGLSTLILLALQQYGVRKLEFLIAFLVFTIAACFFAELGYAKPIAKEVLKGLFVPELKGSGATGLAISLLGAMVMPLSSIPLTV*	209

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Ahy4g2162	208	Pfam	Natural resistance-associated macrophage protein	40	200	IPR001046	GO:0016020\|GO:0030001\|GO:0046873
	Ahy4g2162	208	PRINTS	Natural resistance-associated macrophage protein signature	190	208	IPR001046	GO:0016020\|GO:0030001\|GO:0046873
	Ahy4g2162	208	PRINTS	Natural resistance-associated macrophage protein signature	115	134	IPR001046	GO:0016020\|GO:0030001\|GO:0046873
	Ahy4g2162	208	PRINTS	Natural resistance-associated macrophage protein signature	87	113	IPR001046	GO:0016020\|GO:0030001\|GO:0046873
	Ahy4g2162	208	PRINTS	Natural resistance-associated macrophage protein signature	140	161	IPR001046	GO:0016020\|GO:0030001\|GO:0046873
	Ahy4g2162	208	PANTHER	SOLUTE CARRIER PROTEIN FAMILY 11 MEMBER	37	201	IPR001046	GO:0016020\|GO:0030001\|GO:0046873
	Ahy4g2162	208	PANTHER	METAL TRANSPORTER NRAMP1	37	201	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Ahy4g2162	Ahy-Chr4	116195339	116197051	Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Ahy4g2162	40	200	Inorganic Solute Cotransporters	AT1G15960	83.851	4.96e-91	275

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Ahy4g2162	K21398		-	ahf:112795271	399.823