Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy4g2104 ATGGATATGGCTTGTAGCATACCACAGTCAAGAATGTTTCATGGGGGTGTAGGACCGTGTTACAGGCACAGGTCAGTAGGTCATTTTGAGTTCAGGGGATGTGCATTTATTGGAAACACAAGGAGTGTTTTGAGATTGCGTTTCAGTGGGATGAACAAAACTAGTGATGTTTCTGATTGTTGGAGTAAATTAAGAGTGGTGCCTGTTCGTGAACTTAATGTTTTGAATATGAGTAGTAGTTTGTATTGTAAGAATCTTTTTACTGGTTCTAGAGTAGTTTGGTCAAAATGCCAGGGTAATGATTCTGTGGCATATGTTGATGGGAATGGGAGGAATGTTGATTATGTGGAAGGATCAGGGGAGGATGCTGGGCTGGGTGTTTCCAGTGCTGAACTGGATGCCCCTTTGGAAGAAAGGGAGAGTGAAATAGGAGTAGAGGAACAAAGCGTGGATGAGCTGAAGGAAATATTACAGAAGGCCTTGAAAGAGCTAGAAGTTGCACGTGTAAATAGTACCATGTTTGAGGAAAAGGTGAAAAAGATATCCGAGACTGCAATTTTCTTGCATGATGAAGCGGCAACTGCTTGGAACAGTGTTAATTCTACCCTTGACATCATTCAAGAAATTTCCAATGAGGAACAAATCGCAAAGGAAGCAGTTCAGAATGCAACCATGGCTCTTTCATTGGCCGAGGCTAGGCTTCAGGTAGCCATAGAATCATTGGAGGCTGCAAAAGAAGAGCGTGATTCAGCACAAGGTTCTAATGAGAGCAATGATGAAAATGACATAATAGAAAAGGAGAAGGCACTTTTGGTTGCTCAAGAAGATATCAAGGAGTGCCAAACAAATTTAGCCAACTCCGAGGTGGAGCTTAAACGGTTGCAAAATAGAAAGGAGGAGTTGCAGACGGAAGTTAGCAAATTGCATGAAATTGCTGAAAAGGCACAGCTGGATGCAGTGAAAGCCGAGGAGGATGTCACAAACATAATGCTTTTAGCGGAGCAAGCTGTTGCCTTTGAACTTGAGGCTACAAAACGTGTAAATCAAGATGTTGTGGCTGTTCCTGAAGAGGAGAAAGTAGTCCAAGGTTTCTCTGGTGATGTCAGTGTTGAAAGAGATGAAGGCTTGCCTATTGATGATGAATCTTTGCTTGGCACGTTATCTTCTGAAACAATATCTGATAAAACCAGCCAACTTCTGGAAGACATAACACAGTCTGACTATTTGAGTGATAACGAGAATTCAGTTCAAACTAAAAAACAAGAAATGCAGAAAGATTTGACTAGAGATAGTTCGTCTCTTGCTCCCAAGGCATTACTGAAGAAATCTTCTCGATTCTTTTCTGCATCATTCTTCTCTTTTACTGAAGAAGATGGAACCGAGTTCACACCAGCATCAGTTTTCCAGAGCCTTATGTTATCTGCAAAGCAGCAGTTTCCCAAGCTGGTTCTTGGGTTGTTGTTTATGGGAGCAGGGGTTGCCATCTATGCCAATAGAGGAGAAAGGACTGCTCAGCTGCTTCAACAGCCTGAAGTTATTGTGACCAGTGTTGAAGAAGCTTCCAGTAGTGCAAAGCCACTGGTTAAGCAATTTAAGAAACTCTCTAAGAAAATAAAGAAAATTATTGCATCGTTACCTCAGCAAGAGGTGAATGAAGAAGAAGCCTCCCTCTTTGATGTGCTATGGTTATTACTTGCAAGTGTTATATTTGTACCAATATTTCAAAAACTTCCCGGAGGCAGCCCTGTTCTTGGCTACTTGGCTGCTGGAATCTTAATTGGGCCTTATGGCCTCTCTATAATTCGACATGTTCATGGGACAAAGGCAATTGCTGAATTTGGTGTTGTTTTCCTTTTATTCAACATTGGCCTGGAGCTCTCTGTTGAAAGACTTAGTTCAATGAAGAAATATGTCTTTGGATTAGGCTCAGCTCAGGTTTTGGCAACTGCTGTAGTTGTTGGATTGGTGGCTCGTATTTGTGGCCAGGCTGGTCCTGCAGCTATTGTCATTGGGAATGGCCTCGCATTATCATCAACTGCGGTTGTTCTGCAGGTGTTGCAGGAGAGAGGTGAGAGCACATCACGGCATGGACGAGCTACATTCTCTGTTTTACTTTTTCAGGATTTGGCAGTCGTGGTCTTGCTGATACTCATTCCTCTTATTTCACCCAATTCTTCCAAAGGAGGGGTTGGTTTTCAAGCCATTGCTGAAGCTCTTGGATTGGCTGCTGTTAAGGCAGCAATTGCCATTACTGCCATAATTGCAGGTGGACGATTGCTCCTTCGACCAATATATAAGCAAGTTGCAGAAAATCAAAATGCAGAAATATTCTCTGCCAACACACTCCTTGTTATTCTTGGGACCAGTCTTCTTACAGCCAGGGCAGGGCTTTCAATGGCATTGGGAGCATTTTTGGCTGGTTTACTGCTGGCAGAAACTGAATTTTCGTTACAGGTTGAATCTGATATTGCTCCATACCGTGGCCTTCTTTTGGGGTTATTCTTTATGACGGTTGGAATGTCAATTGATCCAAAACTTCTTGTTTCAAACTTCCCAGTTATCACCAGCACACTGGGACTGTTAATATGTGGCAAGACTATCTTGGTTTCTGTCATTGGTAAAATCTTTGGGATTTCTATCATTTCTGCCATAAGAACTGGTCTTCTTCTTGCTCCTGGTGGAGAATTTGCATTTGTGGCTTTTGGTGAAGCTGTTAATCAGGGCATAATGTCTTCTGAGATGTCTTCCTTGCTCTTTCTTGTCGTGGGCCTGTCAATGGCCATTACACCTTGGTTGGCTGCAGGAGGCCAGCTGATTGCTTCCCGTTTTGAGCAGCACGATGTTCGAAGTTTATTACCTGTGGAAAGTGAGACAGATGATCTGCAAGATCATATCATCATTTGTGGGTTTGGGCGAGTTGGTCAGATCATTGCCCAACTTCTTTCTGAGAGACTTATTCCTTTTGTTGCACTAGATGTGAGAAGTGATAGAGTGGCAGTTGGACGTGCCCTGGATCTGCCAGTATACTTTGGTGATGCTGGTAGTCGAGAGGTCCTCCATAAAGTTGGGGCTGAAAGAGCATGTGCTGCAGCAATAACTCTAGATACACCTGGTGCAAATTATAGAACCGTTTGGGCTCTGAGCAAGTACTTCCCAAATGTGAAGACTTTTGTTCGTGCTCATGATGTTGATCATGGATTGAATTTAGAGAAGGCTGGAGCTACTGCTGTTGTTCCAGAGACCTTAGAACCTAGTCTTCAACTAGCAGCTGCTGTCTTGGCTCAGGCCAAGCTTCCCACATCGGAGATTGCAGCAACCATAAATGAATTCAGATCCCGCCATCTGGCCGAGCTCACGGAGCTGTGCGAAGCAAGTGGAAGTTCTCTTGGTTATGGATTCAATAGAATTATGAGCAAACCCAAATCTCAATCACCGGATTCACTTGATGATGCTCAAGTGTCTGAAGGGACATTGGCCGTATGA 3483 0.4335 MDMACSIPQSRMFHGGVGPCYRHRSVGHFEFRGCAFIGNTRSVLRLRFSGMNKTSDVSDCWSKLRVVPVRELNVLNMSSSLYCKNLFTGSRVVWSKCQGNDSVAYVDGNGRNVDYVEGSGEDAGLGVSSAELDAPLEERESEIGVEEQSVDELKEILQKALKELEVARVNSTMFEEKVKKISETAIFLHDEAATAWNSVNSTLDIIQEISNEEQIAKEAVQNATMALSLAEARLQVAIESLEAAKEERDSAQGSNESNDENDIIEKEKALLVAQEDIKECQTNLANSEVELKRLQNRKEELQTEVSKLHEIAEKAQLDAVKAEEDVTNIMLLAEQAVAFELEATKRVNQDVVAVPEEEKVVQGFSGDVSVERDEGLPIDDESLLGTLSSETISDKTSQLLEDITQSDYLSDNENSVQTKKQEMQKDLTRDSSSLAPKALLKKSSRFFSASFFSFTEEDGTEFTPASVFQSLMLSAKQQFPKLVLGLLFMGAGVAIYANRGERTAQLLQQPEVIVTSVEEASSSAKPLVKQFKKLSKKIKKIIASLPQQEVNEEEASLFDVLWLLLASVIFVPIFQKLPGGSPVLGYLAAGILIGPYGLSIIRHVHGTKAIAEFGVVFLLFNIGLELSVERLSSMKKYVFGLGSAQVLATAVVVGLVARICGQAGPAAIVIGNGLALSSTAVVLQVLQERGESTSRHGRATFSVLLFQDLAVVVLLILIPLISPNSSKGGVGFQAIAEALGLAAVKAAIAITAIIAGGRLLLRPIYKQVAENQNAEIFSANTLLVILGTSLLTARAGLSMALGAFLAGLLLAETEFSLQVESDIAPYRGLLLGLFFMTVGMSIDPKLLVSNFPVITSTLGLLICGKTILVSVIGKIFGISIISAIRTGLLLAPGGEFAFVAFGEAVNQGIMSSEMSSLLFLVVGLSMAITPWLAAGGQLIASRFEQHDVRSLLPVESETDDLQDHIIICGFGRVGQIIAQLLSERLIPFVALDVRSDRVAVGRALDLPVYFGDAGSREVLHKVGAERACAAAITLDTPGANYRTVWALSKYFPNVKTFVRAHDVDHGLNLEKAGATAVVPETLEPSLQLAAAVLAQAKLPTSEIAATINEFRSRHLAELTELCEASGSSLGYGFNRIMSKPKSQSPDSLDDAQVSEGTLAV* 1161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy4g2104 1160 ProSiteProfiles RCK N-terminal domain profile. 964 1086 IPR003148 GO:0006813
Ahy4g2104 1160 Pfam Sodium/hydrogen exchanger family 561 932 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Ahy4g2104 1160 Gene3D - 553 940 IPR038770 -
Ahy4g2104 1160 PANTHER K(+) EFFLUX ANTIPORTER 1, CHLOROPLASTIC-RELATED 1 1160 - -
Ahy4g2104 1160 Coils Coil 143 170 - -
Ahy4g2104 1160 Gene3D - 960 1124 - -
Ahy4g2104 1160 Coils Coil 270 325 - -
Ahy4g2104 1160 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 961 1102 IPR036291 -
Ahy4g2104 1160 MobiDBLite consensus disorder prediction 1139 1160 - -
Ahy4g2104 1160 TIGRFAM 2a37: transporter, monovalent cation:proton antiporter-2 (CPA2) family 564 843 IPR004771 GO:0006812|GO:0008324|GO:0016021
Ahy4g2104 1160 Pfam TrkA-N domain 965 1078 IPR003148 GO:0006813
Ahy4g2104 1160 Coils Coil 227 261 - -
Ahy4g2104 1160 PANTHER K(+) EFFLUX ANTIPORTER 3, CHLOROPLASTIC 1 1160 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy4g2104 Ahy-Chr4 114985254 114996121 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy4g2104 1 1160 Inorganic Solute Cotransporters AT4G00630 67.541 0.0 1414
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy4g2104 - - gmx:100818163 1753.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy14g2387 14 126666962 126677512 Ahy4g2104 4 114985254 114996121 hybridization
Ahy4g2104 4 114985254 114996121 Ahy12g0024 12 1283067 1291261 PCT
Ahy12g0024 12 1283067 1291261 Ahy4g2104 4 114985254 114996121 PCT