Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy4g2083 ATGGCGACTCCAGAAGAGGCAAAGCTCGAAACTTTCTTTCAGTGGTTACAGGCAAATGGGGTGGAGCTACGAGGCTGCAAGATCAAGTACTGTGATTCCAGAAAAGGGTTTGGCATATTTTCCGATAAAGATGTCTCTGATGGTGTTTTGTTGGTTGTTCCGCTTGACTTAGCAATTACTCCCATGAGGGTGATGCAAGATCCTCTTCTAGGGCCAGCATGTAGATCCATGTTTGAAGAAGGACATGTGGATGACAGGTTGCTAATGATGCTCTTGCTGACTGTGGAGCGATTGCGCAAGAATTCTCTGTGGAAACCGTACCTCGATATGCTCCCAACCACTTTTCACAATCCACTTTGGTTTAGCGATGACGAACTTCAAGCACTAAGAGGAACAACTTTATACCGTGCAACTGAGTTGCAGAAGAAAAGCCTGGTATCTTTATATGAAACTAAAGTGAAGGATTTGGTGAAGAAGCTTTTGACTCTTGATGGAGCTTCAGAGATTGAGGTGCGCTATGAAGATTTCCTTTGGGCCAATTCAGTATTCTGGAGCCGTGCTTTGAACATTCCGATGCCTCGTTCTTATGTATTTCCAGAAATGCAAGAAGCTCGAGAAAGTTGCATTCCAGAAGGTGATGGAAAAGGGAGTCAGGTTAAACAATCCGAAAATCTAACGAAGGAAATGATGTGTACCACGACTCAAGGAGACACTGTTTGGGTAGAGGGTCTTGTCCCTGGCATTGACTTTTGCAACCATGATCTGAAGCCGATAGCAACATGGGAAGTTGATGGAACTGGTTCAACAACAGGGGCTCCTTGCTGCATGTACCTTCAATCTGCTTCTCCAAGTCCCTTGCGGATTGATCAAGAAATTTCCATCAGTTATGGCAACAAAGGAAATGAGGTTCACTATCCAGCAGAAGCACTCAATACTATTTCTTTTTCGGAGTCCAAAAGCCAGCTGCTCGAAGTGCAGAAGGCTGAAATGAGATGTCTTTTACCTAAAGCTTTGCTGGAACAAGGATTTTTTCCATTAGGCACCCAAAATAAAGGAGAAAACAACAATGGCAAGGTTGATCAAGTCGCCAACTATAGTTGGAGTGGTCAGCGTAAGACGCCATCGTATGTAAACAAGCTGGTTTTTCCTGAAAAATTTATGACTACTTTGAGGACCATAGCCATGCAAGAAGATGAACTTTACAAGGTTTCCTCAATGCTTGAAGAGCTTGTAGGACCTGAAGGGGAGAGAGAACTATCTGATACAGATGTGCAAGCAGCAATATGGGAGGTTTGTGGTGATTCCGGAGCTTTCCAAATTCTTGTTGATCTTCTTCGTGTGAAGTTGATGGATCTTGAAGAGGGTTCTGGAACAGAAGAAAGTGACCTTGATTTGCTCAAGAAGGCTCTTATTATTGATAGCCACGAAAATAACAAACATCCAAGCAAAATGGAAAATGAGTCAGAAGAACAAGAACGCATTGTGATGAGTAGAAACAAGTGGTCTTCAATTGTATATAGGCGTGGCCAAAAGCAGCTAACAAGGTTATTCTTGAAAGAAGCAGAACATGCTCTTCAGTTATCACAAAATGAACAAGACTTTACTGTTCCTTAA 1614 0.4275 MATPEEAKLETFFQWLQANGVELRGCKIKYCDSRKGFGIFSDKDVSDGVLLVVPLDLAITPMRVMQDPLLGPACRSMFEEGHVDDRLLMMLLLTVERLRKNSLWKPYLDMLPTTFHNPLWFSDDELQALRGTTLYRATELQKKSLVSLYETKVKDLVKKLLTLDGASEIEVRYEDFLWANSVFWSRALNIPMPRSYVFPEMQEARESCIPEGDGKGSQVKQSENLTKEMMCTTTQGDTVWVEGLVPGIDFCNHDLKPIATWEVDGTGSTTGAPCCMYLQSASPSPLRIDQEISISYGNKGNEVHYPAEALNTISFSESKSQLLEVQKAEMRCLLPKALLEQGFFPLGTQNKGENNNGKVDQVANYSWSGQRKTPSYVNKLVFPEKFMTTLRTIAMQEDELYKVSSMLEELVGPEGERELSDTDVQAAIWEVCGDSGAFQILVDLLRVKLMDLEEGSGTEESDLDLLKKALIIDSHENNKHPSKMENESEEQERIVMSRNKWSSIVYRRGQKQLTRLFLKEAEHALQLSQNEQDFTVP* 538
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy4g2083 537 Pfam SET domain 36 297 IPR001214 GO:0005515
Ahy4g2083 537 SUPERFAMILY SET domain 8 302 IPR046341 -
Ahy4g2083 537 CDD SET_LSMT 32 305 - -
Ahy4g2083 537 ProSiteProfiles SET domain profile. 26 297 IPR001214 GO:0005515
Ahy4g2083 537 PANTHER UNCHARACTERIZED PUTATIVE METHYLTRANSFERASE 3 532 - -
Ahy4g2083 537 PANTHER SET DOMAIN-CONTAINING PROTEIN 3 532 - -
Ahy4g2083 537 Gene3D set domain protein methyltransferase, domain 1 5 305 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy4g2083 Ahy-Chr4 114586271 114591792 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Ahy4g2083 SET 9.10E-08 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy4g2083 - - gmx:100777394 860.522
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy14g2363 14 126203655 126209198 Ahy4g2083 4 114586271 114591792 hybridization