Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy4g2073 ATGGTGGAAGGTGGTGGAGGTGAGGTTTCGGTTTCGGATTCCGTTGATGAACTTTCAACAGAAGAATGGTTGTTGAATGCAGAGAAGCTTGTTCCTGAGGCAATTGATAAGGCTAAAGAGGTTAAAGTGTTCCTGGGAAGATGGAAGATGATTGTTTCGAAACTCGAACAGATCCCTTCGCGGCTGTCGGATTTGTCGAGCCACCCGTGTTTCGGGAAGAATGCGCTTTGCAAGGAGCAGTTACAGGCAGTTACAAGGACTCTGAAGGAATCAATTGAATTGGCTGAGATTTGTTTGAAGGACAAGTTTGAAGGTAAGTTGAAGATGCAGAGTGACCTTGATTCGTTAGCCGCCAAATTGGATTTGAATTTGAGGGATTGTGGCCTCCTCGTCAAGACTGGTGTCCTTGGCGAGGTGGCCCGGCCAGAGGCGGATGCTGCCACGCATGGCAGCATCAAAGAATTGCTCGCTCGCCTCCAGATCGGGCATCTGGAGGCGAAGCATAGAGCATTGGATAGTCTTGTGGAAGCAATGAGGGAAGATGAGAAGAAAGTTTTGGCGGTTATGGGGAGAAGCAACATTGCTGCTTTGGTTCAGTTACTAACCGCCACTTCTCACAGGATAAGAGAGACGGCGGTTACAGTTATATGCTCGCTCGCGGAATCCGGTAGCTGTGAGAATTGGTTAGTTTCCGAAGGCGTTCTGCCGCCTCTTATAAGGCTGGTTGAGTCTGGTAGTTTTGTGGGAAAAGAGAAAGCTGTAATTTCTCTTCAGAGGCTGTCAATGTCGGCGGAAACAGCCCGCGCAATCGTCGGACACGGCGGCGTTAGGCCGTTGGTTGAGCTTTGTCAGACCGGGGATTCGGTGTCGCAATCCGCGGCTGCTTGTACACTGAAGAATATTTCGGCCGTTCCGGAGGTTAGACAAGCTTTGGCCGAAGAAGGCGTCGTTAGAACAATAATCAATTTGCTTAACTGCGGAATTCTGTTGGGATCCAAAGAGTACGCGGCCGAGTGCCTGCAGAATCTAACTGCAAGCAACGAGAATCTTCGTAGGAATATAATAACAGAAGGTGGCGTTATGAGTCTTCTAGCGTATCTTGATGGTCCTTTGCCTCAAGAATCTGCAGTTGGCGCGTTGAGGAACTTGGTAGGATCTGTCCCGGAGGACACACTCGTTTCGCTCGGCTTCCTTCCAAGATTGTCTCACGTGCTGAAATCCGGTTCCCCGGGAGCTCAGCAGGCGGCCGCAGCCGCAATCTGCCGAGTTTCCAGCACACCGGAGATGAAAAAGCTAGTGGGCGAAGCCGGATGCATACCTCATCTGGTAAAGATGCTGGAGGCGAAATCAAGCAGCGGTAGGGAGGTGGCGGTGCAGGCGATGGCGAGCCTAATTAGCGTGTCGCGGAATCAGAGAGAAGTGAAGAAGGATGATAAGAGTGTTCCAAACTTGGTTCAGTTGCTTGATCCAAGTCCACAGAACAGTGCAAAGAAATATGCAGTTTCATGCTTGGGATCACTTTCTTCATGCAAGAAATGCAGGAAGCTTATGATCTCTTATGGCGCAATTGGGTATCTGAAGAAACTCACTGAGATGGATATTCCAGGTGCTAAGAAACTTCTTGAGAGATTGGAGAAAGGCAATTTTAGAAGCTTGTTTAGCAAGAAATAG 1671 0.4931 MVEGGGGEVSVSDSVDELSTEEWLLNAEKLVPEAIDKAKEVKVFLGRWKMIVSKLEQIPSRLSDLSSHPCFGKNALCKEQLQAVTRTLKESIELAEICLKDKFEGKLKMQSDLDSLAAKLDLNLRDCGLLVKTGVLGEVARPEADAATHGSIKELLARLQIGHLEAKHRALDSLVEAMREDEKKVLAVMGRSNIAALVQLLTATSHRIRETAVTVICSLAESGSCENWLVSEGVLPPLIRLVESGSFVGKEKAVISLQRLSMSAETARAIVGHGGVRPLVELCQTGDSVSQSAAACTLKNISAVPEVRQALAEEGVVRTIINLLNCGILLGSKEYAAECLQNLTASNENLRRNIITEGGVMSLLAYLDGPLPQESAVGALRNLVGSVPEDTLVSLGFLPRLSHVLKSGSPGAQQAAAAAICRVSSTPEMKKLVGEAGCIPHLVKMLEAKSSSGREVAVQAMASLISVSRNQREVKKDDKSVPNLVQLLDPSPQNSAKKYAVSCLGSLSSCKKCRKLMISYGAIGYLKKLTEMDIPGAKKLLERLEKGNFRSLFSKK* 557
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy4g2073 556 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 12 556 - -
Ahy4g2073 556 SMART arm_5 468 509 IPR000225 GO:0005515
Ahy4g2073 556 SMART arm_5 386 425 IPR000225 GO:0005515
Ahy4g2073 556 SMART arm_5 346 385 IPR000225 GO:0005515
Ahy4g2073 556 SMART arm_5 181 221 IPR000225 GO:0005515
Ahy4g2073 556 SMART arm_5 426 466 IPR000225 GO:0005515
Ahy4g2073 556 SMART arm_5 304 345 IPR000225 GO:0005515
Ahy4g2073 556 SMART arm_5 263 303 IPR000225 GO:0005515
Ahy4g2073 556 Pfam Armadillo/beta-catenin-like repeat 426 464 IPR000225 GO:0005515
Ahy4g2073 556 Pfam Armadillo/beta-catenin-like repeat 267 303 IPR000225 GO:0005515
Ahy4g2073 556 SUPERFAMILY ARM repeat 149 533 IPR016024 -
Ahy4g2073 556 Gene3D - 150 546 IPR011989 -
Ahy4g2073 556 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 12 556 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy4g2073 Ahy-Chr4 114358243 114363840 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy4g2073 202 475 U-box Gene Family AT3G54790 30.108 5.98e-18 85.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy4g2073 - - gmx:100789140 850.506
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy14g2353 14 125949817 125953881 Ahy4g2073 4 114358243 114363840 hybridization
Ahy4g2073 4 114358243 114363840 Ahy12g2518 12 114115756 114119748 PCT
Ahy4g2073 4 114358243 114363840 Ahy2g2181 2 97567236 97571225 PCT
Ahy12g2518 12 114115756 114119748 Ahy4g2073 4 114358243 114363840 PCT
Ahy2g2181 2 97567236 97571225 Ahy4g2073 4 114358243 114363840 PCT