Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy4g2050 ATGAATGGGGGATCTTTGGGCGGCGGGAAGCTGCAGCGGGAATGTAATTTTGATTTGAATGTCGAGGTGTGTGAAGATGTCAAGGAAACCTGCATCAATGTTGCCAATGGAAATGGTATTTATGAGGCAAATGTCATATCGGGTAAGATGGGTCAGCTCCAAGGAGACATGACAAATCTTAATCAGAGATCTATGGAAGTTGATGATGTTCGTAGTGATTTGAATGAGGTTTTCAAAGATTCCACACCAGAGGATGTTCCTGTAATTGTAATATCTGGTCATGAACAGTTCAAAATTTTTCAGGCAAAGTTGCAATTACCCTCTTCTTCCGAAAATTTAAATTCAGATGATGTTCCTGTTCTTGAAGTCTTTTTTATTTATGCTTGTTTAAGGTCATTCAGTACTTTATTATTTTTGAGTCCATTTGAGTTGGAGGATCTTATAGCTGCTTTGAAGTCCAAAACCCCAAGTATATTATTTGATAGCATTCATGTTTCTATTTTGGAAACTCTGAAAAAACATTTGGAATACCTTTCCAACGAGGGTATTCAATTTGCATCTGATTGTCTGAGGTATATGTAA 582 0.3694 MNGGSLGGGKLQRECNFDLNVEVCEDVKETCINVANGNGIYEANVISGKMGQLQGDMTNLNQRSMEVDDVRSDLNEVFKDSTPEDVPVIVISGHEQFKIFQAKLQLPSSSENLNSDDVPVLEVFFIYACLRSFSTLLFLSPFELEDLIAALKSKTPSILFDSIHVSILETLKKHLEYLSNEGIQFASDCLRYM* 194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy4g2050 193 PANTHER PHD-FINGER AND DNA BINDING DOMAIN-CONTAINING PROTEIN 89 191 - -
Ahy4g2050 193 SMART testlast3 117 177 IPR018501 -
Ahy4g2050 193 PANTHER PHD FINGER FAMILY PROTEIN 89 191 - -
Ahy4g2050 193 ProSiteProfiles DDT domain profile. 117 177 IPR018501 -
Ahy4g2050 193 Pfam DDT domain 122 172 IPR018501 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy4g2050 Ahy-Chr4 113914429 113915493 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy4g2050 81 193 PHD Transcription Factor Family AT5G12400 53.097 8.06e-31 116
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR DDT Ahy4g2050 DDT 1.30E-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy4g2050 - - adu:107485507 377.096