Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy4g2027 ATGGGCAATAAAATTGAAGGAACTATGAATAAGGTGATTACCAGTGATCCTTATGTAACAATTTCTGTAGCAAACGCTGTAATTGGGAGGACTTTTGTGATTAGCAATAGTGAAAATCGTTGGATGCAACATTTCTATGTTCCTGTTGCACATCATGCTGCTGAAGTGCACTTTGGTAAAGACAGTGATGTTGTCGGTTCACAGCTCATCGGCATCGTGGCAATTCCAGTGGAACAGATATACTCGGGGGAGCTGGTCGAAGGCACCTATCCCATCCTAAATAGTAGTGGGAAGCCTTGTAAGCCAGGTGCTGTTCTGAGATTATCCATTCAGTATATCCCAATGGCACAACTAAGCATTTATCATCAAGGAGTTGGAGCAGGGCCTGAGTACATTGGAGTTCCTGCGACTTATTTTCCTTTGAGGAAAGGTGGAACGGTTACTCTATATCAAGATGCTCATGTTCCAGATGGCTGCCTCCCTAACGTGTTTCTTGACAATGGGAAGACTTATGTGAATGGAAAGTGTTGGTATGACATCTATGATGCCATGCGTCAAGCGCGTTTGATTTATATTACAGGATGGTCAGTGTGGCACAAAGTTACATTAATAAGGGATGGTGCTGTCAAAGCATCGGATATCCTTGGTGATCTTTTGAGGTCAAAGTCACAGGAAGGAGTAAGAGTGCTTCTCCTTGTATGGACGACCCTACATCAAGAACATTTTGGTTATAAAACAGATGGTGTCATGGCAACTCATGATGAGGAAACAAGACGATTTTTCAAGAATTCTTCAGTGCATGTGCTGCTTTGTCCTCGCAGTGCTGGAAAACGACATAGCTGGTACAAGCAAAAGGAAGTTGGAACAATATATACACATCATCAGAAAACCGTTATTGTGGATGCTGATGCTGGAAATAACATGAGAAAAATAATAGCATTTGTTGGTGGACTTGATTTGTGTGATGGACGTTATGATACTCCCGATCATCATATACTTAGGACCCTGCATACACTGCATAAAGATGACTATCACAACCCTACTTTCACGGGTAATGTAGGTGGTTGTCCCCGGGAGCCATGGCATGACTTGCATTCCAAAATTGATGGTCCAGCAGCTTATGATGTTTTGAAAAATTTTGAGGAGCGCTGGTTAAGAGCTTCAAAACCTCATGGGATCAAAAAGTTAAAGAAATATGATGATGCTTTGCTTAAGCTGGAAAGAATTCCAGATATCATTCGCATGACTGATCTTCCTTGTATTGGTCATGACGATCCTGAGTCTTGGCATGTTCAGATATTTCGTTCAATTGATTCAAATTCTGTTAAAGGATTTCCAAAGGATCCAAAAGAAGCTTCTAGCAAGAACCTAGTATGTGGGAAGAATGTGCTGATCGACATGAGCATACATACAGCATATGTGAAGGCCATTCGAGCTGCACAGCATTACATTTATATAGAGAATCAATATTTCATTGGGTCTTCATACAATTGGAGTCAACATAAAGATCTTGGTGCTAATAATTTGATACCATTGGAAATTGCTCTGAAGATTGCTGAAAAGATAAAAGCACATGAAAGATTTGCAGTGTATATTGTTATTCCAATGTGGCCAGAAGGTGTTCCGACCGGGGCTGCTACACAAAGGATTCTGTATTGGCAGAATAATACAATGCAAATGATGTATGACACTGTTTACAAGGCTTTGGTTGATGCTGGGGTTGAAGCAGCATTCTCTCCACAAGACTATTTGAATTTTTTCTGTCTAGGCAATCGGGAGGCCACAAGTATGTATGATAATGTCACAGTCTCTGGAGCTCCTCCCCAGGCAAATAGTGTCCAAGCAAATAGTCGAAATAGTCGGCGTTTCATGATTTATGTTCATTCGAAAGGCATGATAGTTGATGATGAATATGTGATATTGGGATCCGCAAACATCAATCAGCGCTCTATGGAAGGAACAAGAGACAGTGAGATTGCAATGGGAGCCTATCAACCACATTATACCTGGGCAAGAAAATCTACTTACCCCCTTGGACAAGTCCATGGATATAGGATGTCGCTTTGGGCAGAACACACAGGAACAATTGAAGATTGTTTCTTGCAGCCAGAGAGCCTCGAGTGCGTGCGAAGGGTTAAAGCGATGGGCGAAATGAACTGGAGACAGTATGCAGCAAATGAAGTAACAGAGATGAGAGGACATCTAATGAAATACCCTGTTGATGTTGATAGAAAGGGCAAAGTTAGACCCCTTCCTGGCCATGAAGAGTTCCCTGATGTTGGAGGGAAAATAGTTGGGTCATTCCTTGCCATGAAGGAGAATCTAACCATTTGA 2334 0.4177 MGNKIEGTMNKVITSDPYVTISVANAVIGRTFVISNSENRWMQHFYVPVAHHAAEVHFGKDSDVVGSQLIGIVAIPVEQIYSGELVEGTYPILNSSGKPCKPGAVLRLSIQYIPMAQLSIYHQGVGAGPEYIGVPATYFPLRKGGTVTLYQDAHVPDGCLPNVFLDNGKTYVNGKCWYDIYDAMRQARLIYITGWSVWHKVTLIRDGAVKASDILGDLLRSKSQEGVRVLLLVWTTLHQEHFGYKTDGVMATHDEETRRFFKNSSVHVLLCPRSAGKRHSWYKQKEVGTIYTHHQKTVIVDADAGNNMRKIIAFVGGLDLCDGRYDTPDHHILRTLHTLHKDDYHNPTFTGNVGGCPREPWHDLHSKIDGPAAYDVLKNFEERWLRASKPHGIKKLKKYDDALLKLERIPDIIRMTDLPCIGHDDPESWHVQIFRSIDSNSVKGFPKDPKEASSKNLVCGKNVLIDMSIHTAYVKAIRAAQHYIYIENQYFIGSSYNWSQHKDLGANNLIPLEIALKIAEKIKAHERFAVYIVIPMWPEGVPTGAATQRILYWQNNTMQMMYDTVYKALVDAGVEAAFSPQDYLNFFCLGNREATSMYDNVTVSGAPPQANSVQANSRNSRRFMIYVHSKGMIVDDEYVILGSANINQRSMEGTRDSEIAMGAYQPHYTWARKSTYPLGQVHGYRMSLWAEHTGTIEDCFLQPESLECVRRVKAMGEMNWRQYAANEVTEMRGHLMKYPVDVDRKGKVRPLPGHEEFPDVGGKIVGSFLAMKENLTI* 778
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy4g2027 777 Gene3D Endonuclease Chain A 436 675 - -
Ahy4g2027 777 Pfam Phospholipase D Active site motif 290 324 IPR001736 GO:0003824
Ahy4g2027 777 Pfam Phospholipase D Active site motif 624 650 IPR001736 GO:0003824
Ahy4g2027 777 Gene3D C2 domain 2 100 IPR035892 -
Ahy4g2027 777 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 289 324 IPR001736 GO:0003824
Ahy4g2027 777 PANTHER PHOSPHOLIPASE D 2 777 IPR015679 -
Ahy4g2027 777 SUPERFAMILY Phospholipase D/nuclease 138 388 - -
Ahy4g2027 777 SMART pld_4 289 324 IPR001736 GO:0003824
Ahy4g2027 777 SMART pld_4 623 650 IPR001736 GO:0003824
Ahy4g2027 777 PANTHER PHOSPHOLIPASE D ALPHA 1 2 777 - -
Ahy4g2027 777 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 12 115 IPR035892 -
Ahy4g2027 777 Pfam Phospholipase D C terminal 697 767 IPR024632 -
Ahy4g2027 777 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 623 650 IPR001736 GO:0003824
Ahy4g2027 777 SUPERFAMILY Phospholipase D/nuclease 454 709 - -
Ahy4g2027 777 CDD C2_plant_PLD 11 113 - -
Ahy4g2027 777 Pfam C2 domain 11 92 IPR000008 -
Ahy4g2027 777 Gene3D Endonuclease Chain A 169 404 - -
Ahy4g2027 777 PIRSF PLD_plant 1 777 IPR011402 GO:0004630|GO:0005509|GO:0016020|GO:0046470
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy4g2027 Ahy-Chr4 113259805 113265793 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy4g2027 4 777 Phospholipase D Gene Family (Wang group) AT2G42010 75.280 0.0 1267
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy4g2027 K01115 - gmx:100791059 1363.21