Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy4g2000 ATGGTACTAGTTGATGTCACTCCTTTGTCTCTTGGTATAGCCACTCATGGAGATTTGATGAGTGTAGTGATTCCGAGGAATGCCGCCATTCCTGTTAAGATGGGTTCTAATTTAATTATGGATCATCCCAATCATTCACACCCTTTACACTTGAACCCTCCTGGAGCTCCATACAAGTGCAATGGTTGTAAAGAACTAGGGTTTGGACCAAGTTATGGTTGTGAAATTTGCAACTACATCCTTCACGAAGAGTGCGCGAACGTCGATCGCCTCGCCTTCCATCGATTTTTCCCGAAAAGCCACTTCGAGTTCTTCGAGAAGGCACCCGGATACCGAACTAGGTATTGTGATGCTTGTGGAAAAGATGTGCTAGGGTTTGTGTACCATTGTTCTCAGACAGGATTTGATTTGCACCCATGTTGTTTGAAGCTGAAAGATAGTGTTTGCGACAAAGATGGATGTGTGACATTGAAATTGTCTCAAAAGGTTCCTAGGAAGTGCCTAAAATGTAAGAGTAGGAATGTTGTGAACAAAGTTAAGGGTTGGTCTTATGTGTCTTGTAATGAGGATAATAATTCTTGTTACCATGTTTCTTGTGTTAAGGAATTGATTCTTGAGAATTGGAAGAGAGGCTATTTTTCAACTCAGGAACAAAACAATTATTCAATAATTCATCATGAGATGATTGAATATGAATCTCGTCAACTTGCTTTAACAAGGTCATCAAGGAGATTGGGGACAATCAAGAAGTATACAAAGATAGCGGTTGTGGTCTTCAAGCTAATAGTTTCAGCCATTTTTGGAAACCCTATTTCTGCCATTGCTACTCTTGTTGAAGCCCTAGTTCAAGATTATTGA 858 0.4009 MVLVDVTPLSLGIATHGDLMSVVIPRNAAIPVKMGSNLIMDHPNHSHPLHLNPPGAPYKCNGCKELGFGPSYGCEICNYILHEECANVDRLAFHRFFPKSHFEFFEKAPGYRTRYCDACGKDVLGFVYHCSQTGFDLHPCCLKLKDSVCDKDGCVTLKLSQKVPRKCLKCKSRNVVNKVKGWSYVSCNEDNNSCYHVSCVKELILENWKRGYFSTQEQNNYSIIHHEMIEYESRQLALTRSSRRLGTIKKYTKIAVVVFKLIVSAIFGNPISAIATLVEALVQDY* 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy4g2000 285 SUPERFAMILY Cysteine-rich domain 72 146 IPR046349 -
Ahy4g2000 285 Pfam C1 domain 106 141 IPR004146 -
Ahy4g2000 285 Pfam C1 domain 43 86 IPR004146 -
Ahy4g2000 285 PANTHER CYSTEINE/HISTIDINE-RICH C1 DOMAIN FAMILY PROTEIN 37 281 - -
Ahy4g2000 285 PANTHER CYSTEINE/HISTIDINE-RICH C1 DOMAIN PROTEIN 37 281 - -
Ahy4g2000 285 Pfam Hsp70 protein 1 34 IPR013126 GO:0005524|GO:0140662
Ahy4g2000 285 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 1 44 IPR029047 -
Ahy4g2000 285 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 1 47 IPR029047 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy4g2000 Ahy-Chr4 112736445 112740015 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy4g2000 1 33 Calmodulin-binding Proteins AT3G12580 60.606 5.48e-07 48.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy4g2000 - - adu:107485302 374.015