Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy4g1978 ATGGAGGCTTCGAGGCCGTCTTCATCCCTCATCGTTTGTGTTGTTTGTGCAAGTGGAGGCTGTGAGGATGTTGGAAGCATGTTGGATAGTAGATGTGGTGGTAAAGTAAGGGTTTTTGATGTAATAATGGCATCAAGTAGCAAGTTTTGCAAGGATGCGTGTATGTGGAATGAGCCTCTTTTGGACAACTGGATGGAGGGCAATGCTGGTGTGTCGAATCCACAGCTGGGTGGTATTGTTCATGGAGTTGGTTTTACTCTTAGCAGGGGTGAGGGATATGCTGTGAGAAGTTATATTCTATGTGGTGACTATGATAACGCATTCCACATAATGCCAGCTGGTAGCATAATGTTTGTCTTCTTATTTCAGGACACAATGTATGATACCAGAGTGGAGGAAGATGCTGAGTCATCCGACTGGGAAGGTCGGGGGGCTTTAATGTTGCCCGTTTTTTTGGGTTTGGATGGGTTGCGAGCTGAAGATGTTCTTGAAATGGAGTTCTCTTCACCTCAGGAGGCTAGCGGCTTCTATAACAATTACAGCCGACTAAAGGGCTTTGCATCAAGGCGAGGCAAGACGGTTAGAAACACTGCCGGAGAGATAGTGCGGTACACGTTTATTTGTAATAGGCAAGGATTTCGAGAGAAGAAATGGTTGGAAAAGGTTGATCGCAAAAGGGAGCATAAGACTGTAACCCGATGTGGATGTTTGGCGGAGATGAGGATAAAGAGGAAAGAGGGTAGTGGGAGGTGGTATGTGTCGTGTTTTGTCGAGGAGCATAACCATGAACTTGCGTATGGGAAGCTTGTTGATTATCTGCGGTCACACAGGAAGATATTTGAGGTAGAAGTTGCTCAGCTAACAAGCATGAGAGAGATTGGGATTAGCATACCTAAGATTTATGAGTCCTTCGCAGCACAACTAGGGGGTTTTAACCTGGTAACATTCACAAAGCAAGATATGTATAATGAGATACGGAAACAGAGAGGTCTGCAAGGCGGAGACGTAAGTGCAGCTGTTAGGTACTTGGAAGGTCTGGCACGCATGGATGGGAAAATGTTTTGGCGGTACAAGTTGGGATCAGGGCAACACCTATGCAACTTGTTTTGGAGCGATGGTCGTTGTCAGGAAGATTATGGGATATTCGGCGATGTGCTAGCATTCAACGCTACCTATGGCCGCAACAAGTACAACCTACCTGTTGTAGTATTTTCCGGAGTAAACCACCACAACCAGACATGCGTATTCGGAACAGCAATGGTGTCATGCGAATCGCAGGAGTCATATATTTGGGTTCTTCGCCAGTTTCTGGAATGCATGCAAGGTAAGGCACCGCAATCAGTCATCACGGATGGCGACCCGGCCATGCGTATAGCAATCCGCACCGTTTTTCCTGACGCACATCATCGGTTGTGTGCCTGGCATCTGCTGAGGAACTCGACTGCTAACATAAGCGATCCGAGATTCACACAAATGTTTAGACACTGCATGCTGGCAGATATGGAAATCGAAGAGTTCGAAGCGTATTGGGAGTCAATGGTCAATGAGTGCGGTGTCAGGGAGGTTGAGTGGGTTAAGGACTTGTACACCAAAAAGCACGCTTGGGCAACCGCATACATTCGTGGTAGATTTTTTGCTGGAGTACGGACAACCTCTAGGTGCGAGTCACTACACGCCAAACTAGGGAGGTTTGTTGAGAGCAGGTACGGGGTGTTAGAATTTGTCAGAAATTTCCAAAGGTGTGTGGATTTTCTGCGTGACACCGAGGATGAGCTAGACTTTCGTTCATGGTACGGAACACCTGTGCTACAAACGGAGTTCGTTGAGCTGGAAAAGTCTGGATGGACTATGTTCACCCGCGAAATGTTTCTCAGATACCGGGATAGCCTGAAACGGTGTGTTCGTGTTAGAATATGTGAATTTGATGACAGTGACAACCCTCATGCATATACTCTTCAGAAGTATCGGAGGCCTGAGATGAATTGGAAGGTTTATAGGGACCATATCTCGAACAGATTTACTTGCAGCTGCATGCGTATGGAGTCGTTTGGCATTCCTTGTGTGCATATCCTTTCCGTTTGTGTAAGGCTAGACTTGGTGGAAATCCCTGAAAGCCTGGTGCTGCGTAGGTGGTCTAAGGCAGCCAAATTGGAGATACATAACCAATGTGGTGAGCAACACACTGCTGAACCAAGTGTGACCTATAGGACACGATTGGGTGCTTTCTCCCAGCTGTGTAAGCGTTTAGGGCGCGTTGCTTGCATGAGCGATGAAGACTTCAAGCTTTACTCAAACAAGCTTATGAGCGATGCTCTGTTCCTTGAAATAAAGTACAGCTTAAGACCATTAACGGATAATATGACAATAGCAAATGATTGCGCGGTGAAGGACCCCATTCGTGTCAGGACTAAAGGCACGGCTCGGATGAGTCAAGCAAGCGGTTCTGCGCCGAAAACGAAAAGAAAGTGCAGCACATGCGGGAAGCTCGGGCACCGGAGGACTAGATGCCCCAACGGAGGCGCGCAACCTTCAACGAGGAACAAAGAATCACTTGCTGGGAGAAATAAACGCAAGCGAACGAAGGTACCCGTCGTTGTCCCAGATAATTGTCCGCCTGAAAATGCATGTCAATCTGGATGCGACATATGGGAACAATTTTCGCTTGCAGACCCATGA 2676 0.4727 MEASRPSSSLIVCVVCASGGCEDVGSMLDSRCGGKVRVFDVIMASSSKFCKDACMWNEPLLDNWMEGNAGVSNPQLGGIVHGVGFTLSRGEGYAVRSYILCGDYDNAFHIMPAGSIMFVFLFQDTMYDTRVEEDAESSDWEGRGALMLPVFLGLDGLRAEDVLEMEFSSPQEASGFYNNYSRLKGFASRRGKTVRNTAGEIVRYTFICNRQGFREKKWLEKVDRKREHKTVTRCGCLAEMRIKRKEGSGRWYVSCFVEEHNHELAYGKLVDYLRSHRKIFEVEVAQLTSMREIGISIPKIYESFAAQLGGFNLVTFTKQDMYNEIRKQRGLQGGDVSAAVRYLEGLARMDGKMFWRYKLGSGQHLCNLFWSDGRCQEDYGIFGDVLAFNATYGRNKYNLPVVVFSGVNHHNQTCVFGTAMVSCESQESYIWVLRQFLECMQGKAPQSVITDGDPAMRIAIRTVFPDAHHRLCAWHLLRNSTANISDPRFTQMFRHCMLADMEIEEFEAYWESMVNECGVREVEWVKDLYTKKHAWATAYIRGRFFAGVRTTSRCESLHAKLGRFVESRYGVLEFVRNFQRCVDFLRDTEDELDFRSWYGTPVLQTEFVELEKSGWTMFTREMFLRYRDSLKRCVRVRICEFDDSDNPHAYTLQKYRRPEMNWKVYRDHISNRFTCSCMRMESFGIPCVHILSVCVRLDLVEIPESLVLRRWSKAAKLEIHNQCGEQHTAEPSVTYRTRLGAFSQLCKRLGRVACMSDEDFKLYSNKLMSDALFLEIKYSLRPLTDNMTIANDCAVKDPIRVRTKGTARMSQASGSAPKTKRKCSTCGKLGHRRTRCPNGGAQPSTRNKESLAGRNKRKRTKVPVVVPDNCPPENACQSGCDIWEQFSLADP* 892
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy4g1978 891 MobiDBLite consensus disorder prediction 834 862 - -
Ahy4g1978 891 Pfam FAR1 DNA-binding domain 176 265 IPR004330 -
Ahy4g1978 891 ProSiteProfiles Zinc finger SWIM-type profile. 665 698 IPR007527 GO:0008270
Ahy4g1978 891 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 161 735 IPR031052 GO:0006355
Ahy4g1978 891 PANTHER OS02G0262500 PROTEIN 161 735 - -
Ahy4g1978 891 Pfam MULE transposase domain 385 479 IPR018289 -
Ahy4g1978 891 ProSiteProfiles Zinc finger CCHC-type profile. 821 838 IPR001878 GO:0003676|GO:0008270
Ahy4g1978 891 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 21 - -
Ahy4g1978 891 Pfam SWIM zinc finger 674 695 IPR007527 GO:0008270
Ahy4g1978 891 SMART 26again6 673 700 IPR006564 GO:0008270
Ahy4g1978 891 SUPERFAMILY Retrovirus zinc finger-like domains 803 840 IPR036875 GO:0003676|GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy4g1978 Ahy-Chr4 112169733 112173996 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Ahy4g1978 MULE 4.70E-26 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy4g1978 - - aip:107611673 1508.43