Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy4g1966 ATGAGTGCAAGCACAAGCCGTGGCGGCGGCCGCGGCGGCGGTAGCAGTGGCGCTAGTGGGAGTGGTACCAAAGGTAAGGGTAGTGGCGGTCCTTGCGGCGCTTGCAAGTTTCTGAGGAAGAAATGTGATCCGGGATGTGTCTTTGCTCCGTACTTCGATCCTGATCAAGGTGCAATCTACTTTGCATCGGTGCACAAGGTTTTTGGGGCTAGCAACGTTGGTAAGCTTCTTTCCAAAATTCCAGTTCATAAGAGGCTTGATGCTGTTATTAGTATTTGTTATGAAGCACAAGCACGAATGAGAGACCCTGTTTATGGATGTGTTGGTCAAATCTGTACCCTTCAACAACAGGTGTTGGCTTTACAAGCCGAACTCTCATTCTTACAAAATCATCTTGCTACAATGGAGATACGACAACCGCCACCAATTTTTCCAACGCAAGGAGTGCCGACATCACCTATTTTCTCAGTTGCAGACTTACCAACGGTTGTGGGTGTTGCCCCCACCACCTTATCAATGCCGGCCACTTTTGATCCACCTTCCCACTTTGATCCAGCAACTTGGGCTATGTATCAACGGGCCATGATGGACCCACGGCAATACATGGCTGTTTCAAGCCCAATAGGCCCAACTGCTAGTGGTGATGTTGATATCCAAACAGTTGCATGTGAGCTCATCAATAGGCACGTGCCTCTGCAAGCACCACCTCAGACTTCTGGTTCCAATGCTACATCGACGTCAGCTTCATCACTTACTTCTTCTAAGTGA 768 0.4896 MSASTSRGGGRGGGSSGASGSGTKGKGSGGPCGACKFLRKKCDPGCVFAPYFDPDQGAIYFASVHKVFGASNVGKLLSKIPVHKRLDAVISICYEAQARMRDPVYGCVGQICTLQQQVLALQAELSFLQNHLATMEIRQPPPIFPTQGVPTSPIFSVADLPTVVGVAPTTLSMPATFDPPSHFDPATWAMYQRAMMDPRQYMAVSSPIGPTASGDVDIQTVACELINRHVPLQAPPQTSGSNATSTSASSLTSSK* 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy4g1966 255 MobiDBLite consensus disorder prediction 232 255 - -
Ahy4g1966 255 PANTHER LOB DOMAIN CONTAINING PROTEIN 1 230 - -
Ahy4g1966 255 PANTHER LOB DOMAIN-CONTAINING PROTEIN 18 1 230 - -
Ahy4g1966 255 MobiDBLite consensus disorder prediction 1 23 - -
Ahy4g1966 255 Pfam Lateral organ boundaries (LOB) domain 31 129 IPR004883 -
Ahy4g1966 255 ProSiteProfiles LOB domain profile. 30 132 IPR004883 -
Ahy4g1966 255 MobiDBLite consensus disorder prediction 1 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy4g1966 Ahy-Chr4 111833464 111850750 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy4g1966 34 228 AS2 family AT2G45420 50.980 1.16e-62 196
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Ahy4g1966 LOB 2.90E-37 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy4g1966 K21994 - gmx:100790517 236.884