Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy4g1953 ATGGCTGCTTGTGCTTTGTTCACTGGTGCCAGTAACAACACTGCCGAAGATGGGAATGTCAGCACCACCACCACCACCACCAACGGTGCTGCTGCTGCCGGAAGTGGTAGTAGCCCTCTCACCAGTGCTTCCAGCAACATCAGCGCCGGTGAAGAACAACAACAACAACAACACATGCTTCTTCTCCATGGTAGTAGTGGCTTCATGAATCAGCCTCATTGTGAGAGGAAATTAGTGAGAAAAAGAATGGCTTCTGAGATGGAACTTCACCCTTCCATAACCAACACCAACACCACCACCACCACCATTTCTGAGTATCCTAGGTTTCCTCGTAGAACCACCAACAACATCAACACCTCCTCTTTCATTCAAAAGGGCTCCCCTGTTGGTACAGGTAGTAATTGTAACTATCCTTATAATAATAATAACAATAACAATAATAATATTAATAATAACAATAATAGTAATAGTATTAGTGATGTTGTTGTATCAAGAGATAACGTTACTATTCCAAATTACCCCATTGTGACGCTCACAACCAACTACTCCACTATGATGCTACCTTCTCTTTCATCATCTTCATCATCGTCATCATCTTCTTCCACCAATCTCATCAACACCGTCAATTCTTCCTCGCCCTCAATACCCTCCACAACCATAACCGTTTCGGCTCCAAACTACGCTCAACACTTCAATCAAGAAATCCTACTTGACAACAATCAAAACACCACATCACCTGCAGTTTGCGGATTCTCCGGTCTGCCACTCTTTCCATCTTCACAATCGCAGAGAAACATAAGGAACAACTCTGCAAATATTGTTGAGGTTGTTACTTCTTCGCCTTCTTCCATGGATGAAAGCTCAGCCGCTTCTAATTGGATCGATGGAATATTGAAGGATCTAATTCACAGCTCTAATAGTGTCTCAATCCCTCAGCTCATCAACAACGTCAGGGAGATTATATACCCTTGCAACCCAAACTTGGCCATGCTTCTTGAGTACAGGCTCCGCCTCCTCACTTCTGACTCCTCCTCCGCCGCCGTGCCCGCAGCACCACCGCCACCACCGCCTCCACAAAACAAAACTCCGGTTATGAAGCAAACAAATACTTCAAACATGCATGCTTACGGTGCTATGCATTTTCAAGATTCATCTTTGAACCAGTACTGGCCTGTAGTACCGCCAACGCCGTTAGATTCTAACAACAACAATTCAGTTTCGTTGGCCAATACTTTACCATCACCGCCACCGCCTCCTCCGCCGCCACAGCCACCGCAACAAGAGAAACCCGAAGAAGATCTTGTTACAGCACCGGCAACCACCACGAGCACCGCCACCGCCACAGAAATGGCGGTGCTAACGAGAAAGAAAACCGAGGAGATGAATCAACAGAAGAAGAAAGACGAAGAAGGCTTGCACCTCCTCACACTACTCCTCCAGTGCGCAGAAGCAGTTTCAGCGGAGAATCTAGAAGACGCGAACAAGATGCTTCTAGAAATTTCTCAACTGTCGACGCCGTTCGGCACATCAGCGCAACGCGTGGCAGCGTATTTCTCGGAAGCCATATCCGCAAGGCTGGTCAGCTCTTGCCTCGGAATCTACGCAACGCTGCCAATCGTTCCTCACAGCCAGAAAGTGGCTTCCGCTTTCCAAGTCTTCAACGGAATCAGCCCCTTCGTCAAGTTCTCCCACTTCACCGCCAACCAAGCCATTCAAGAAGCGTTCGAGAGAGAAGAAAGGGTTCACATCATAGATCTAGATATAATGCAAGGCCTCCAGTGGCCTGGCCTCTTCCATATTCTGGCTTCCAGGCCCGGTGGGCCTCCTTACGTGAGACTCACGGGCCTTGGAACCTCTATGGAAGCGCTCGAGGCCACTGGTAAGCGGTTATCGGATTTTGCCAATAAGCTTGGCCTTCCGTTTGAATTCTTTGGCGTTGCGGAGAAAGTTGGGAACGTTGATCCTGAGAGGCTTAATGTTAGTAAGGCTGAGGCTGTTGCTGTTCATTGGTTGCAGCATTCTCTTTATGATGTTACTGGTTCGGACACAAATACTTTGTGGCTTTTGCAGAGGTTGGCACCTAAGGTGATAACAGTGGTAGAGCAAGACCTAAGCAACACAGGTTCATTCTTGGGAAGGTTTGTGGAAGCCATACACTACTACTCAGCACTATTTGACTCCCTTGGTTCAAGCTATGGAGAAGAGAGTGAGGAGAGACATGTGGTGGAGCAGCAACTCCTCTCAAGGGAGATTCGGAATGTTCTAGCTGTTGGGGGTCCATCAAGGACTGGTGAACCAAAGTTTCATAACTGGAGGGAGAAGCTTCAACAATGTGGATTTAGAGGCATATCACTAGCTGGTAATGCTGCTACACAAGCAAGTTTGTTACTTGGTATGTTCCCTTCTGAAGGGTACACTTTGGTGGAGGACAATGGTATTCTTAAACTTGGTTGGAAGGATCTTTGTTTGCTCACTGCTTCAGCTTGGAGACCACCCTATACCACTGCAATGGCTCATCATCATAGTTAA 2529 0.4725 MAACALFTGASNNTAEDGNVSTTTTTTNGAAAAGSGSSPLTSASSNISAGEEQQQQQHMLLLHGSSGFMNQPHCERKLVRKRMASEMELHPSITNTNTTTTTISEYPRFPRRTTNNINTSSFIQKGSPVGTGSNCNYPYNNNNNNNNNINNNNNSNSISDVVVSRDNVTIPNYPIVTLTTNYSTMMLPSLSSSSSSSSSSSTNLINTVNSSSPSIPSTTITVSAPNYAQHFNQEILLDNNQNTTSPAVCGFSGLPLFPSSQSQRNIRNNSANIVEVVTSSPSSMDESSAASNWIDGILKDLIHSSNSVSIPQLINNVREIIYPCNPNLAMLLEYRLRLLTSDSSSAAVPAAPPPPPPPQNKTPVMKQTNTSNMHAYGAMHFQDSSLNQYWPVVPPTPLDSNNNNSVSLANTLPSPPPPPPPPQPPQQEKPEEDLVTAPATTTSTATATEMAVLTRKKTEEMNQQKKKDEEGLHLLTLLLQCAEAVSAENLEDANKMLLEISQLSTPFGTSAQRVAAYFSEAISARLVSSCLGIYATLPIVPHSQKVASAFQVFNGISPFVKFSHFTANQAIQEAFEREERVHIIDLDIMQGLQWPGLFHILASRPGGPPYVRLTGLGTSMEALEATGKRLSDFANKLGLPFEFFGVAEKVGNVDPERLNVSKAEAVAVHWLQHSLYDVTGSDTNTLWLLQRLAPKVITVVEQDLSNTGSFLGRFVEAIHYYSALFDSLGSSYGEESEERHVVEQQLLSREIRNVLAVGGPSRTGEPKFHNWREKLQQCGFRGISLAGNAATQASLLLGMFPSEGYTLVEDNGILKLGWKDLCLLTASAWRPPYTTAMAHHHS* 843
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy4g1953 842 MobiDBLite consensus disorder prediction 348 362 - -
Ahy4g1953 842 MobiDBLite consensus disorder prediction 11 56 - -
Ahy4g1953 842 MobiDBLite consensus disorder prediction 188 212 - -
Ahy4g1953 842 PANTHER PROTEIN SCARECROW 221 832 - -
Ahy4g1953 842 Pfam GRAS domain family 475 830 IPR005202 -
Ahy4g1953 842 MobiDBLite consensus disorder prediction 345 366 - -
Ahy4g1953 842 ProSiteProfiles GRAS family profile. 465 830 IPR005202 -
Ahy4g1953 842 MobiDBLite consensus disorder prediction 392 410 - -
Ahy4g1953 842 MobiDBLite consensus disorder prediction 93 153 - -
Ahy4g1953 842 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 221 832 IPR005202 -
Ahy4g1953 842 MobiDBLite consensus disorder prediction 411 428 - -
Ahy4g1953 842 MobiDBLite consensus disorder prediction 392 443 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy4g1953 Ahy-Chr4 111562640 111566615 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy4g1953 472 830 GRAS Transcription Factor Family AT5G41920 57.337 4.27e-141 422
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Ahy4g1953 GRAS 4.50E-123 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy4g1953 - - gmx:100803919 970.304
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy14g2217 14 121959522 121963412 Ahy4g1953 4 111562640 111566615 hybridization
Ahy12g2042 12 104501041 104503653 Ahy4g1953 4 111562640 111566615 PCT
Ahy2g1769 2 90020272 90022811 Ahy4g1953 4 111562640 111566615 PCT