Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy4g1948 ATGGCTTTGAACTTCAACTTCCTCAGGCTTCTTGTCTTCATCTTTTCCCTTGTTAGCTTTATCATGAGTTTCCCAACAACTACTAAAGCAAAAGAACTTGATTACCAAGGCCCAAAGTGTTCTGAAGATAGAACCACTTTTAACAGCACCTACCAAGTAAACCTCATCACACTTTTCTCATCCCTATCTTCCAAAGCCACCATCACCATCTTCTACAACGACACCATCATAGAGAACAAAGATACTTCTAATGCAGTGTATGGACTCTTCATGTGCAGGGGTGATGTACCCTTTGATGTTTGTGGAGACTGCGTTCAAAGCGCAACCCATGTTCTCTCTACAGAGTGCACCTTATCCCTATGGGGTATGATCTGGTACGAACAATGCATGGTTCGGTATTCCAACACTCGTTTCTTTTCTGTTCCCAAAACAGAGCCCTTCACTCCCATGTCCAACAACTTCAATGTTTCCATTAATCAAGACATCTTTGTCCCTCTTCTTGTCAACACAGTGAACGAAACTGCAGATCAAGCCGCGGTTTCTCTCAACAAGTATGCCACAAAGGAACAAAAGGTAACAAAACTTGAGACGATTTTTACTCTTGCTCAATGCACCCAAGACCTCTCGGTTGGAGATTGCAGATCTTGTCTTGGATTCGCCGTTGGGCAGATCCATGAATGTTGTAAAGGAAGACGAGGAGGGAGAGTATTGCTCCCCAGCTGTAATGTTCGCTTTGAATTTTACCCTTTCTATCGTCATGGCGTCTCTAAAGCACTTGCTCCTGCTACAAAGTATCCAATCATGGAGTCGAAATATTCGCCAGATCCGGGTTATTTGTCTCACCAATGTTCAAATAATCAACCCACAAACTTACAGAAACGCCTAACGACGCTCCTCTCTGACTTGTCTTCCAAGGCAAGAAACTCGAACGACAACGAGTTCTACATGAGCAATGTTAGCAACAACTTCTTTGGCCTCTACTTGTGCCGCGCTGACCTACCCCCTTCTCTCTGCGCAGACTGCATAGTCAACGCCACAAACCGAATCGCCTCCGAGTGTCCAACGTCCATGGAGGCTGTAATCTGGTACAACCATTGCTTGCTTCGTTACTCCAACTACTCTTTCTTCAGAACAATGGGAACTAATCCGAGATTCAAGATGATGAATGTTACCGACTATGACGATTACAAAAGCTACTACAAGTACGAACTGTGGAGTGCGTTGACGAAGGTGGCGGGAGAAATCTGGGATCGGAGTGACAGATATTACACAGAGTCGTTTGTGTTGAACGATGTGCAAAGATTGTTCGTGCAGGGGCAGTGCACGAAAGATCTGGCTACTTTGGATTGTAATTACTGTATTCACGATGTGATTGAAACGGCGATTCCGTGGTGTTGTTTGGGAAGCATAGGTGGCAGAGTTTTGTATCCAAGCTGCACTTTGAGGTTTGAGTTGTTTCCATTCTATAGGAATGGTACGGACGATCAGCCTCCGTCAACTACAACTACAGTGAAAACTGGTCGATCACGAGCAGTTATCTTGATTATTGTTGTCCCCGTTGTTGCTTTGGTGTTACTCCTCTCTTTTTGTTGCTATTTGTTTCGGAAAAGAGCAAGAAAAAGTTACAATAAGACCATCCTCAGAAAAAATTTTGGCCATGAAAGTAACACTATAGGGGGCTTGCAATTCAATTTGTCTATAATTGAAGCGGCAACAAATCACTTTTCACAAGAGAATGAGATTGGCAAAGGTGGATTTGGACAAGTTTACAAGGGTGTTCTTCCTGATGGACGACATATAGCTGTAAAGAGACTTTCAAAAAGTTCTACCCAAGGTGCTACTGAATTCAAAAACGAGGTTTTATTAATAGCCAAACTTCAACATAAAAATCTAGTAGCATTTTTAGGATTCTGTCTTGAAGGACAAGAGAAGATACTTATCTATGAATATGTTCCAAACAAGAGCTTGGATTACTTTCTGTTCGATCCTCATTCTGAGAAGTTGTTAAGTTGGTCTGAACGCTACAATATTATAGATGGAATTGCTCAAGGAATTCTTTACTTACATGAATATTCTCGTCTCAAAGTTATTCATCGTGATCTTAAACCTAGTAATATATTGCTAGATGAAAATATGAATTCTAAAATTTCAGACTTTGGTCTTGCTCGAATCATAGATCAACAACAAGGATCTGCATCTAGAGTTGTTGGAACACTGGGTTATATGTCTCCTGAATACGCAATGCAAGGAAAATTTTCTGAAAAGTCAGATATTTTCAGTTTTGGAGTCATGATTCTCGAAATTATTACAGGAAAAAAGAATGTAGGTTCCAATGAATATTGCAGAAGGTCTTCTAAGTTTAGTGTGGAGACAATTTTGCAACCAAACACCGTTATCCGTATTGGACCCAAAAATGAAAGAAAATTGTTCTGA 2433 0.4114 MALNFNFLRLLVFIFSLVSFIMSFPTTTKAKELDYQGPKCSEDRTTFNSTYQVNLITLFSSLSSKATITIFYNDTIIENKDTSNAVYGLFMCRGDVPFDVCGDCVQSATHVLSTECTLSLWGMIWYEQCMVRYSNTRFFSVPKTEPFTPMSNNFNVSINQDIFVPLLVNTVNETADQAAVSLNKYATKEQKVTKLETIFTLAQCTQDLSVGDCRSCLGFAVGQIHECCKGRRGGRVLLPSCNVRFEFYPFYRHGVSKALAPATKYPIMESKYSPDPGYLSHQCSNNQPTNLQKRLTTLLSDLSSKARNSNDNEFYMSNVSNNFFGLYLCRADLPPSLCADCIVNATNRIASECPTSMEAVIWYNHCLLRYSNYSFFRTMGTNPRFKMMNVTDYDDYKSYYKYELWSALTKVAGEIWDRSDRYYTESFVLNDVQRLFVQGQCTKDLATLDCNYCIHDVIETAIPWCCLGSIGGRVLYPSCTLRFELFPFYRNGTDDQPPSTTTTVKTGRSRAVILIIVVPVVALVLLLSFCCYLFRKRARKSYNKTILRKNFGHESNTIGGLQFNLSIIEAATNHFSQENEIGKGGFGQVYKGVLPDGRHIAVKRLSKSSTQGATEFKNEVLLIAKLQHKNLVAFLGFCLEGQEKILIYEYVPNKSLDYFLFDPHSEKLLSWSERYNIIDGIAQGILYLHEYSRLKVIHRDLKPSNILLDENMNSKISDFGLARIIDQQQGSASRVVGTLGYMSPEYAMQGKFSEKSDIFSFGVMILEIITGKKNVGSNEYCRRSSKFSVETILQPNTVIRIGPKNERKLF* 811
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy4g1948 810 CDD STKc_IRAK 581 796 - -
Ahy4g1948 810 ProSiteProfiles Gnk2-homologous domain profile. 144 250 IPR002902 -
Ahy4g1948 810 ProSiteProfiles Gnk2-homologous domain profile. 273 375 IPR002902 -
Ahy4g1948 810 Gene3D - 147 250 IPR038408 -
Ahy4g1948 810 Gene3D - 277 375 IPR038408 -
Ahy4g1948 810 Gene3D - 382 488 IPR038408 -
Ahy4g1948 810 Gene3D - 34 138 IPR038408 -
Ahy4g1948 810 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 502 779 - -
Ahy4g1948 810 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 273 495 - -
Ahy4g1948 810 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 32 257 - -
Ahy4g1948 810 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 273 495 - -
Ahy4g1948 810 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 32 257 - -
Ahy4g1948 810 PIRSF SRK 484 799 IPR024171 GO:0004674
Ahy4g1948 810 PIRSF SRK 3 82 IPR024171 GO:0004674
Ahy4g1948 810 ProSiteProfiles Gnk2-homologous domain profile. 33 138 IPR002902 -
Ahy4g1948 810 Pfam Protein kinase domain 576 776 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy4g1948 810 SUPERFAMILY Protein kinase-like (PK-like) 557 780 IPR011009 -
Ahy4g1948 810 ProSiteProfiles Gnk2-homologous domain profile. 381 488 IPR002902 -
Ahy4g1948 810 ProSitePatterns Serine/Threonine protein kinases active-site signature. 696 708 IPR008271 GO:0004672|GO:0006468
Ahy4g1948 810 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 502 779 - -
Ahy4g1948 810 SMART serkin_6 575 810 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy4g1948 810 Gene3D Phosphorylase Kinase; domain 1 535 650 - -
Ahy4g1948 810 Gene3D Transferase(Phosphotransferase) domain 1 651 806 - -
Ahy4g1948 810 Pfam Salt stress response/antifungal 399 484 IPR002902 -
Ahy4g1948 810 Pfam Salt stress response/antifungal 40 135 IPR002902 -
Ahy4g1948 810 Pfam Salt stress response/antifungal 169 247 IPR002902 -
Ahy4g1948 810 Pfam Salt stress response/antifungal 285 373 IPR002902 -
Ahy4g1948 810 ProSiteProfiles Protein kinase domain profile. 575 810 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy4g1948 810 ProSitePatterns Protein kinases ATP-binding region signature. 581 603 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy4g1948 Ahy-Chr4 111394602 111404576 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy4g1948 273 774 Receptor kinase-like Gene Family AT4G05200 46.402 6.56e-147 446
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Ahy4g1948 Pkinase 9.00E-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy4g1948 - - ahf:112797275 1629.38
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy14g2213 14 121706954 121717892 Ahy4g1948 4 111394602 111404576 hybridization