Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy4g1905 ATGATGCTACAACATTCAAACATCTTCATAGAACAAGATTTTCTGCTTCTGATTCAGATTCTTGTTCTTGTTCTTCTTCTCTTCCCTCAAACTACAATATCTGATCTACATTCAGAAAAGCAAGCACTCCTTGATTTTGCATCAGCATTTCACCATGGCAAAAAGGTGAATTGGAACATGAACACTTCAATGTGCAATTCATGGAATGGAGTTACCTGCAATCCCAAGGGCACAAATGTAATTTCACTGAGGCTACCAGGTGTTGGTTTGAGAGGTTCTCTGCCACCAAACACAATTGGTAAGCTCAATGGCCTCACAAGTCTTAGTCTAAGGTCTAACACATTGAGTGGCAAAATCCCAAATGACATTCTTGCCCTTCATTCCCTAAGGTTTCTATATCTTCAACATAACAATTTCTCAGGTGAATTTCCAAATTTTCTTCCACCTAGGCTTGTGCTTCTTGATTTGTCACATAACTCTTTCACAGGACAAATTTCAAACTCAATCCAAAATTTGACTAATCTAACTGGTTTGTTCCTCAAGAACAATTCACTTATAGGGCCTATTCCTAATGTAACCCTTCCTAGCCTTAAGGATTTGGATTTGAGCTTTAACAACCTTAATGGTTCAATTCCTTTAGCATTTCATAGGTTTCAATCTTCATCATTTGATGGGAATTTGATGCTATGTGGACCACCTTTGACAAAACAATGTTCCTCATCAAGTCCTCTTAGTAGTCCAATGTTGTCTCCACTAATAGTATCTCAAAATTCAAGTGATGTTTCCAAGAAGAGGCCAATTCTTGGGGTGGTGGTCGCTGCCGCCTTGGGAGGTTTCGGACTACTTTTTCTACTAGTTTTGATGTTGGTGTTGTATTTTCTTAAGAAGAGAGTTGGTGAACAAAATGAGGCACCAAAAGCAAGTAAACTTGGTGAGAATCTTAGGGAGGATTTTGGGAGTGGTGTGCAAGAACCTGAGAAGAACAAGTTGGTATTTTTCGGAGGGTGTTCTTATAACTTTGATCTTGAGGATTTGTTAAGAGCTTCAGCTGAAGTTCTTGGTAAGGGAAGTTGTGGAACAACTTATAAGGCAGTCTTGGAAGAAGGGACAGTAGTTGTTGTTAAGAGGCTGAAGGAAGTTGCAATTGGGAAGAGAGAATTTGAACAGCAAATGGAAACTGTGCAAAAGCTTGATCAGCATCCAAATGTTGTTCCATTTAGTGCTTACTATTATTCCAAGGATGAGAAGCTAGTGGTTTATGATTACCTACCATTTGGAAGCTTTTCCAAGTTATTGCATGGAACAAGGGAAACTGGAAGAACTCCACTAGATTGGGACACCAGATTGAAGATAATGCTTGGAGCTGCTAAGGGTGTTGCTCATATTCATTCTGCAAGTGGAAGGAAATTTGTCCATGGCAATATAAAATCATGTAATGTGCTACTCTTAGGTGATCTACAAGGCTGCATATCGGATTTCGGCTTAGCTCCTCTAGCGAGTTTCTCAGGCTCCTTTAGGAGTCCTGGATATCGAGCCCCCGAGGTTATTGAGACCCAAAAATCCACACAAAAATCTGATGTGTACAGCTTTGGGGTTCTCCTTCTTGAGATGTTGACCGGCAAAACACCGATTCAGTATTCAGGACATGATGATCCGGTTGATCTTCCGAGGTGGGTTCAATCTGTTGTTAGAGAGGAATGGACTGCTGAAGTGTTTGATCTTGAGCTAATGAGGTATCCAAATATTGAGGAAGAATTGGTGCAAATGCTGCAACTTTCAATGGCATGTGTTGCAATGGTTCCTGACACAAGACCCTCAATGGAGGAAGTTGTAAGGGTTATTGAAGAAATCATAGGATCCTATTCTGAGAACCAGACATCATTATCAGACAAGTTCAAGGGAACTCATGATTTCATTCCATACTACTGA 1929 0.4023 MMLQHSNIFIEQDFLLLIQILVLVLLLFPQTTISDLHSEKQALLDFASAFHHGKKVNWNMNTSMCNSWNGVTCNPKGTNVISLRLPGVGLRGSLPPNTIGKLNGLTSLSLRSNTLSGKIPNDILALHSLRFLYLQHNNFSGEFPNFLPPRLVLLDLSHNSFTGQISNSIQNLTNLTGLFLKNNSLIGPIPNVTLPSLKDLDLSFNNLNGSIPLAFHRFQSSSFDGNLMLCGPPLTKQCSSSSPLSSPMLSPLIVSQNSSDVSKKRPILGVVVAAALGGFGLLFLLVLMLVLYFLKKRVGEQNEAPKASKLGENLREDFGSGVQEPEKNKLVFFGGCSYNFDLEDLLRASAEVLGKGSCGTTYKAVLEEGTVVVVKRLKEVAIGKREFEQQMETVQKLDQHPNVVPFSAYYYSKDEKLVVYDYLPFGSFSKLLHGTRETGRTPLDWDTRLKIMLGAAKGVAHIHSASGRKFVHGNIKSCNVLLLGDLQGCISDFGLAPLASFSGSFRSPGYRAPEVIETQKSTQKSDVYSFGVLLLEMLTGKTPIQYSGHDDPVDLPRWVQSVVREEWTAEVFDLELMRYPNIEEELVQMLQLSMACVAMVPDTRPSMEEVVRVIEEIIGSYSENQTSLSDKFKGTHDFIPYY* 643
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy4g1905 642 Pfam Leucine rich repeat 93 139 IPR001611 GO:0005515
Ahy4g1905 642 Gene3D Ribonuclease Inhibitor 37 148 IPR032675 -
Ahy4g1905 642 ProSiteProfiles Protein kinase domain profile. 347 618 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy4g1905 642 PANTHER OS05G0480400 PROTEIN 20 631 - -
Ahy4g1905 642 SUPERFAMILY Protein kinase-like (PK-like) 351 614 IPR011009 -
Ahy4g1905 642 Gene3D Ribonuclease Inhibitor 149 240 IPR032675 -
Ahy4g1905 642 Gene3D Phosphorylase Kinase; domain 1 316 422 - -
Ahy4g1905 642 Pfam Leucine rich repeat N-terminal domain 38 74 IPR013210 -
Ahy4g1905 642 PANTHER OS05G0588300 PROTEIN 20 631 - -
Ahy4g1905 642 SUPERFAMILY L domain-like 54 234 - -
Ahy4g1905 642 Pfam Leucine Rich Repeat 151 172 IPR001611 GO:0005515
Ahy4g1905 642 Gene3D Transferase(Phosphotransferase) domain 1 424 638 - -
Ahy4g1905 642 PRINTS Leucine-rich repeat signature 194 207 - -
Ahy4g1905 642 PRINTS Leucine-rich repeat signature 151 164 - -
Ahy4g1905 642 Pfam Protein kinase domain 350 612 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy4g1905 Ahy-Chr4 110409049 110412189 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy4g1905 23 630 Receptor kinase-like Gene Family AT5G58300 59.098 0.0 701
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Ahy4g1905 Pkinase 2.20E-36 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy4g1905 - - gmx:100810832 844.728
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy14g2164 14 120369228 120372398 Ahy4g1905 4 110409049 110412189 hybridization