Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy4g1897 ATGATGTCACAGAGTGGCCGTTCTCTTACCGACTACATGACGGATCGAAACTTCTCTTCAAACTTGGAATCTGTCATGTTTGGACGAGTCTTGCAAGGGATAGACTCGTCGAAAAGAGATGCCTTGATCATCAAGCAAATAATGCGCCAAATGATTATTTCGCTTAAGAAGATTCATGACTCGGGCATTGTTCACAGGGATATAAAGCCTGCCAACTTGGTGGTTACCAAGCAGGGACAGATCAAACTCATTGATTTTGGTTCAGCTACTGATCTGCGAATCGGAAATAATTATGTTCCCAATTTTACCCCTTTGGATCCTGACTATTGTCCCCCAGAATTGTATGTGCTGCCTGAAGAAACAACCAGTCTTCCTCCAGAGCCAGTTGCATCTTTTCGTTCACCAATATTGTGGCAGTTAAAAAGTCCTGATCTATTTGACATGTATTCTGCTGGGATTATACTCTTGCAAATGGCAATACCAACCTTAAGGTCTAAATCTGCTCTGAAGAATTTCAATTTGGAATTAAGGAACTGTGGATTCGACCTGAAGAAATGTCGGAGCTTTACTCGTAGCCGGTTTGATTTTCGAATCCTTGACGGGGATTCCGGTAGAGGTTGGGACTTAGCAACCAAGCTTATCTCAAAGAGGGATTCCCCGGCGAGTGGATGCTTATCGGCCGCGGCTACTTTGAGGCATCCTTATTTTCTTCTTGGTGGTGATCAGGCAGCTTTAGTCCTTTCAAAATTAAGCTTGAGCATAAAGTGA 768 0.4336 MMSQSGRSLTDYMTDRNFSSNLESVMFGRVLQGIDSSKRDALIIKQIMRQMIISLKKIHDSGIVHRDIKPANLVVTKQGQIKLIDFGSATDLRIGNNYVPNFTPLDPDYCPPELYVLPEETTSLPPEPVASFRSPILWQLKSPDLFDMYSAGIILLQMAIPTLRSKSALKNFNLELRNCGFDLKKCRSFTRSRFDFRILDGDSGRGWDLATKLISKRDSPASGCLSAAATLRHPYFLLGGDQAALVLSKLSLSIK* 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy4g1897 255 SUPERFAMILY Protein kinase-like (PK-like) 32 216 IPR011009 -
Ahy4g1897 255 Gene3D Transferase(Phosphotransferase) domain 1 32 238 - -
Ahy4g1897 255 ProSitePatterns Serine/Threonine protein kinases active-site signature. 63 75 IPR008271 GO:0004672|GO:0006468
Ahy4g1897 255 ProSiteProfiles Protein kinase domain profile. 1 236 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy4g1897 255 PANTHER SERINE/THREONINE-PROTEIN KINASE STN8, CHLOROPLASTIC 7 253 - -
Ahy4g1897 255 Pfam Protein kinase domain 40 236 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy4g1897 255 PANTHER SERINE/THREONINE-PROTEIN KINASE STN8, CHLOROPLASTIC-RELATED 7 253 IPR044803 GO:0004674|GO:0009579
Ahy4g1897 255 SMART serkin_6 4 236 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy4g1897 Ahy-Chr4 110216313 110218051 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy4g1897 50 236 AGC Kinase Gene Family AT3G10540 28.646 7.01e-11 60.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK Group-Pl-4 Ahy4g1897 Pkinase 3.30E-19 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy4g1897 - - ahf:112794393 500.36
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy4g1897 4 110216313 110218051 Ahy12g0615 12 9888186 9891215 PCT
Ahy4g1897 4 110216313 110218051 Ahy2g0516 2 7366952 7370115 PCT