Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy4g1892 ATGGAAAAATTTGAGACAGTTGTTGATGGTAGGGTTATCTACACAAGCAACTTGATTGATAAATGGATTCAGGTAGATGAAGATGACCTAGATGTCTTTGATGTGATTGGTTACTTCAAGACAAAGCTAATGCGACCAGAGACATCACTTGAGCCTAATCCTACAATACCTAAGCCAAACCCCCAGCTCAGTCCCATTGCACCTAAACCCAACTTCAAGCTCAATTCTACTGCACCTGAGCCTAACTTCGAGTCCAACGCCACTACACATGAGCCTAACCTCCAGCCCAAACCCACTGCACAAAAGCCCAAGATTTTTTTCAATTCCACTGCACTGAAGACCAAATCCAAGTTTGATTCTCCTGTTGTTGATGCCACCACGGAAATGAAATCAACTACACCCATTGTCAACCTTCATCCAAAGTCAACTATCCCCACTACTACTAATTTGAAGCCTACTACCTCAAAACCCACTGTCCTCAAGCATACTGCTATGAAGAACAAAGCCTTAAAATCTACTGTTTTCAATACCAGTAACACCAAGCCCATTGTAATAAAAACTGCACAACCGATGATGTGTAATACAACAACCAAACATGTGTTGATGATTCGTCTTCTAACTCATGAGTTTGCAGAAGATAGTCTTTACAAGCCACCTTTTCCACCAGGGTTTGAAGAGTCTAGCAATCATGAAGAAGCAATTGGAACTTCATCAAGAGACATTGTTAATAGAAATAATAGGAAAATGAGTCAATTTGGAAAAGAAAAAAAAAGGTTGTGGATGAAGTTGGTCCCATTCAAACTGATGACTCAGAAAATGCGGCATCGATTGGCATGGCGAGTTGAAGCGGAGACAGCGGAGGTTAGGTGTGCTGCGGTGGTGACTGGCATAGTGGGGGCGGATTCTGGGTTTTGGCTAGGTCAATCAGCTTTGCTGGCAATTGTAACAATAGACAAATACACCACAAAACGTGATTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTTTGGAGGATTTGTACATTATATGAGTTCTAATCAACCACTTCTCTCTGATTCAGATCTTCCTCCACTGATTCAACACCGCCCGAAGAAATCAGGATCCATAGCTTCCTCTGTGTTTGACGATGCTTCTGAATCTCATCATAAAACAGGTCTTGATCTGACGGAAGACAAAGACTATGATTTAGCTAGTGAAGCTAGCTTCCATTCAGCAGTTGAGACCAATTTCACTTTTGGGACAGAGAAAGATTTCAACTTTGGTGAGTCCCATTTGCCCCACAAACACCACACGCACCCTTTGGAATGCTCCACGAAGGAGAGGGTGCGAGGGGTATCGTGGGGTGCAATGGAACTGCATGATGCCACCACCAATAGTAGTAGCACTAGTGTGCCCTTTGAAATCTCAGGTTCTTCTTCACAACAGCATGTAGTTCATCATGATAATAGGTTGAGTAGTAATCACAATAATTATAGTAAGCCTCAGAGGGTTAGGCACAAGAGCAGCGTGCAGTTTGATGATGCTTTGTTGCATGATGATAGTGCTAGGTTGATATATATTAATGATCCTAAGAGGACTGATGATAAGTGTGAGTTGCCGGGGAATGAGATCAGGACTAGTAAATACACAATTGTTACCTTCTTGCCTAAGAATCTTTTTATTCAGTTTCATAGGGTTGCTTATTTGTATTTCCTTGCTATTGCGGCTCTCAATCAGCTTCCTCCCTTGGCCGTATTTGGGAGGACTGTGTCACTCTTCCCGCTGTTGTTTGTGCTCTGCGTCACTGCTATTAAGGATGGATATGAAGACTGGCGGCGGCACAGGTCGGATCGCAATGAGAACAACCGGGAATCATTGGTGCTTCAGCATGATGATTTCCGGCCAAAGAAGTGGAAGAATATACAAGCTGGTGAGGTTGTTAAGATCTTTGCTGATGAGACGATTCCAGCTGACATGGTCTTGCTGGGGACAAGTGATCAAAGTGGGCTTGCCTATATTCAGACAATGAATTTGGATGGAGAGTCGAATTTGAAGACTAGGTATGCTAAGCAGGAAACAACTGCTGCAGTTTCTTCGGAAGCTTGTCGTGTTTCTGGGGTTATCAGATGCGAGCAGCCTAACCGGAATATTTATGAGTTCACGGCAAACATGGAGTTCAACGGACTTAAGTTTTCGCTTAGCCAGTCTAACATTGTTCTGCGTGGTTGCCAACTGAAGAACACAGATTGGATCATTGGTGTTGTGGTTTATGCCGGACAAGACACAAAAGCAATGATGAACAGCACACCTTCTCCTTCTAAGAGAAGCAAACTTGAAAGTTACATGAACAGAGAAACCCTTTGGTTGTCAATTTTTCTTTTCATCATGTGTTTAGTTGTGGCCATTGGGATGTGTCTTTGGCTGGTGCGGCACAACAGCCAGCTTGATACCTTGCCTTACTACAGAAAACGATACTTCAACAATGGGCCAGATAATAGAAAGAGATACAAGTATTATGGGATACCAATGGAGGCATTTTTCTCCTTCCTGAGTTCCATTATAGTGTTTCAGATAATGATACCAATATCTCTTTACATCACGATGGAATTGGTTCGTTTGGGCCAGTCATACTTCATGATTGAAGATGGGGATATGTATGATGCTAACTCTGGATCAAGGTTTCAGTGTAGGTCATTAAATATAAATGAAGATTTGGGTCAAATACGCTATGTATTTTCAGACAAGACAGGAACACTAACCGAAAACAAAATGGAATTCCAGAGAGCTAGTGTATATGGGAAGAATTACGGGAACTCGTTGGTCGTGGCTGATGATACAGCTGCACCTGTTATTCCTAGACGGAGATGGAAGCTCAAATCTGAAATCAGAGTTGATTCTGAACTGCTGACAGTGTTGCAGAGCGAATCACATGGAGATGACAGAATTGCTGCACATGAATTTTTTCTTACATTGGCAGCTTGCAATACTGTGATCCCTATTCCTACTGGTGGTACATTCTCCAGTCCTGGAACAAGTGAATCAGATGAAGATATGGAAGGTATTGAGTACCAGGGAGAATCCCCTGATGAACAAGCTCTAGTCTCTGCTGCTTCTGCATATGGATATACCCTTTTTGAGCGAACATCCGGACACATTGTTATCGACGTCAATGGTGAGAAGCTCAGATTGGACGTATTGGGCCTACACGAGTTTGATAGTGTGCGCAAGAGGATGTCTGTTGTTATTCGTTTTCCCAACAACGTTGTAAAGGTGTTGGTCAAAGGTGCTGATACTACAATGTTTAGCATTTTAGCAAATGACAGTGAGAGCCACAATACCATACGAGATGTAACACAGAGTCATCTGAATGAATATTCTTCACTAGGTCTGCGCACTCTTGTAGTTGCATCTAGAGATCTTTCAGATGCTGAACTTGAAGAGTGGCAAAGCATGTATGAAGAGGCCAGCACTTCTTTGCATGAAAGAGCTGCTAAACTACGTCAAACAGCAGCGTTTATAGAATGCAACTTAAAGCTACTTGGAGCAACGGGAATTGAGGACAAGCTACAAGAGGGTGTACCAGAAGCCATTGAGTCCCTGCGGCAAGCTGGAATCAAGGTCTGGGTTCTTACTGGTGATAAGCAGGAGACAGCAATTTCAATTGGTCTCTCTTGCAAACTTCTCACTGCAGATATGCAACAGATTATTATAAATGGCACTTCAGAGGCTGATTGTCGTAATCTTTTGGGTGATGCTAAAGCTAAATATGGCGTGAGGTCTTCAAGTAATCAGAATCGGAAACAAAAATCCAATGCTGGACTTGGTGATCTTGATATTCCCAATGGTTCGAAGTCATTGAGTTTGCCTAAGTGGAATCCAGGACAGGAAGAAGGAATTACTGCTCCATTGGCACTCATAATTGATGGGAACAGTTTGGTGTATATTTTGGAGAAGGAATTAGAGTCAGAGCTTTTCGACCTGGCAACTTCCTGTAGGGTTGTCTTGTGCTGCCGTGTTGCTCCTTTGCAGAAAGCTGGAATTGTTGCTTTGATAAAGAGCCGCACGGATGATATGACACTGGCAATTGGTGATGGGGCCAATGATGTGTCGATGATCCAAATGGCAGATGTTGGTGTTGGAATATGTGGGCAGGAAGGGCGCCAAGCGGTGATGGCATCAGATTTTGCAATGGGGCAATTTCAGTTCTTGAAAAAATTACTCCTGGTTCATGGGCACTGGAATTATCAGCGTGTGGCTTACTTAATTCTGTACAACTTTTACCGCAATGCTGTCTTTGTATTGATGTTATTCTGGTATATATTATGCACTGCTTTTTCTACAACATCTGCGTTGACAGATTGGAGTAGTGTATTCTATTCTGTGATATACACATCTGTACCTACCATTTTTGTTGGTATTCTGGACAAAGACTTGAGCCATAGGACACTCTTGAAGTATCCGAAGCTGTACACTGCTGGTCACAGGCAAGAGGCATACAATTTGCACTTATTCTGGATCACAATGATTGACACAGTATGGCAGAGCCTTGTTCTCTTCTACACTCCTTTGTTCACATACAAGGATAGTGCGATTGATATATGGAGCATGGGCAGTTTGTGGACAATTGCGGTTGTTATTCTTGTGAATGTACACCTGGCCATGGACATCAACCGTTGGGTATTAATTACTCATGCTGCTGTATGGGGATCAATAATCATTACATATGGTTGCATGATAGTCTTGGATTCAATACCTGTCTTTCCCAATTACTGGACTATTTATCAGCTGGCAGTGTCCCCTACATATTGGATAACCATTTTGCTTATAATTATCGTAGCGCTGCTCCCTCGCTTTACTTGCAAAGTTGTTTGCCAAATCTTTTGGCCTTCAGATATCCAGATAGCCAGAGAAGCTGAGCTACTGAGAAAACGACATAATCATGTGCAGTCGAGGCAACAAGTTTCCAGTTAA 4953 0.4256 MEKFETVVDGRVIYTSNLIDKWIQVDEDDLDVFDVIGYFKTKLMRPETSLEPNPTIPKPNPQLSPIAPKPNFKLNSTAPEPNFESNATTHEPNLQPKPTAQKPKIFFNSTALKTKSKFDSPVVDATTEMKSTTPIVNLHPKSTIPTTTNLKPTTSKPTVLKHTAMKNKALKSTVFNTSNTKPIVIKTAQPMMCNTTTKHVLMIRLLTHEFAEDSLYKPPFPPGFEESSNHEEAIGTSSRDIVNRNNRKMSQFGKEKKRLWMKLVPFKLMTQKMRHRLAWRVEAETAEVRCAAVVTGIVGADSGFWLGQSALLAIVTIDKYTTKRDSSSSSSSSSSSFGGFVHYMSSNQPLLSDSDLPPLIQHRPKKSGSIASSVFDDASESHHKTGLDLTEDKDYDLASEASFHSAVETNFTFGTEKDFNFGESHLPHKHHTHPLECSTKERVRGVSWGAMELHDATTNSSSTSVPFEISGSSSQQHVVHHDNRLSSNHNNYSKPQRVRHKSSVQFDDALLHDDSARLIYINDPKRTDDKCELPGNEIRTSKYTIVTFLPKNLFIQFHRVAYLYFLAIAALNQLPPLAVFGRTVSLFPLLFVLCVTAIKDGYEDWRRHRSDRNENNRESLVLQHDDFRPKKWKNIQAGEVVKIFADETIPADMVLLGTSDQSGLAYIQTMNLDGESNLKTRYAKQETTAAVSSEACRVSGVIRCEQPNRNIYEFTANMEFNGLKFSLSQSNIVLRGCQLKNTDWIIGVVVYAGQDTKAMMNSTPSPSKRSKLESYMNRETLWLSIFLFIMCLVVAIGMCLWLVRHNSQLDTLPYYRKRYFNNGPDNRKRYKYYGIPMEAFFSFLSSIIVFQIMIPISLYITMELVRLGQSYFMIEDGDMYDANSGSRFQCRSLNINEDLGQIRYVFSDKTGTLTENKMEFQRASVYGKNYGNSLVVADDTAAPVIPRRRWKLKSEIRVDSELLTVLQSESHGDDRIAAHEFFLTLAACNTVIPIPTGGTFSSPGTSESDEDMEGIEYQGESPDEQALVSAASAYGYTLFERTSGHIVIDVNGEKLRLDVLGLHEFDSVRKRMSVVIRFPNNVVKVLVKGADTTMFSILANDSESHNTIRDVTQSHLNEYSSLGLRTLVVASRDLSDAELEEWQSMYEEASTSLHERAAKLRQTAAFIECNLKLLGATGIEDKLQEGVPEAIESLRQAGIKVWVLTGDKQETAISIGLSCKLLTADMQQIIINGTSEADCRNLLGDAKAKYGVRSSSNQNRKQKSNAGLGDLDIPNGSKSLSLPKWNPGQEEGITAPLALIIDGNSLVYILEKELESELFDLATSCRVVLCCRVAPLQKAGIVALIKSRTDDMTLAIGDGANDVSMIQMADVGVGICGQEGRQAVMASDFAMGQFQFLKKLLLVHGHWNYQRVAYLILYNFYRNAVFVLMLFWYILCTAFSTTSALTDWSSVFYSVIYTSVPTIFVGILDKDLSHRTLLKYPKLYTAGHRQEAYNLHLFWITMIDTVWQSLVLFYTPLFTYKDSAIDIWSMGSLWTIAVVILVNVHLAMDINRWVLITHAAVWGSIIITYGCMIVLDSIPVFPNYWTIYQLAVSPTYWITILLIIIVALLPRFTCKVVCQIFWPSDIQIAREAELLRKRHNHVQSRQQVSS* 1651
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy4g1892 1650 SUPERFAMILY Calcium ATPase, transmembrane domain M 535 1623 IPR023298 -
Ahy4g1892 1650 SFLD p-type atpase 890 1407 IPR044492 -
Ahy4g1892 1650 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 506 1648 - -
Ahy4g1892 1650 CDD P-type_ATPase_APLT_Dnf-like 535 1516 - -
Ahy4g1892 1650 Pfam Phospholipid-translocating ATPase N-terminal 519 584 IPR032631 -
Ahy4g1892 1650 Pfam Cation transport ATPase (P-type) 1019 1095 - -
Ahy4g1892 1650 PRINTS P-type cation-transporting ATPase superfamily signature 906 920 - -
Ahy4g1892 1650 PRINTS P-type cation-transporting ATPase superfamily signature 1356 1375 - -
Ahy4g1892 1650 Gene3D - 1018 1151 IPR023299 GO:0000166
Ahy4g1892 1650 MobiDBLite consensus disorder prediction 69 101 - -
Ahy4g1892 1650 SFLD Haloacid Dehalogenase 890 1407 - -
Ahy4g1892 1650 Pfam Phospholipid-translocating P-type ATPase C-terminal 1384 1624 IPR032630 -
Ahy4g1892 1650 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 1326 1442 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Ahy4g1892 1650 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 1167 1222 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Ahy4g1892 1650 ProSitePatterns E1-E2 ATPases phosphorylation site. 908 914 IPR018303 -
Ahy4g1892 1650 SUPERFAMILY Calcium ATPase, transduction domain A 617 759 IPR008250 -
Ahy4g1892 1650 SUPERFAMILY HAD-like 893 1400 IPR036412 -
Ahy4g1892 1650 MobiDBLite consensus disorder prediction 52 66 - -
Ahy4g1892 1650 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 912 1187 IPR023299 GO:0000166
Ahy4g1892 1650 PANTHER PHOSPHOLIPID-TRANSPORTING ATPASE 506 1648 - -
Ahy4g1892 1650 Gene3D - 592 762 - -
Ahy4g1892 1650 Pfam E1-E2 ATPase 620 864 - -
Ahy4g1892 1650 MobiDBLite consensus disorder prediction 1253 1275 - -
Ahy4g1892 1650 Gene3D - 1171 1396 IPR023214 -
Ahy4g1892 1650 TIGRFAM ATPase-Plipid: phospholipid-translocating P-type ATPase, flippase 534 1631 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016021|GO:0140326
Ahy4g1892 1650 MobiDBLite consensus disorder prediction 47 101 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy4g1892 Ahy-Chr4 110060939 110072460 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy4g1892 469 1635 Primary Pumps ATPases AT5G04930 55.659 0.0 1321
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy4g1892 K14802 - gmx:100812459 2065.43
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy14g2148 14 119962506 119971151 Ahy4g1892 4 110060939 110072460 hybridization
Ahy4g1892 4 110060939 110072460 Ahy12g0614 12 9881904 9887469 PCT
Ahy4g1892 4 110060939 110072460 Ahy2g0515 2 7358555 7364099 PCT
Ahy12g0614 12 9881904 9887469 Ahy4g1892 4 110060939 110072460 PCT
Ahy2g0515 2 7358555 7364099 Ahy4g1892 4 110060939 110072460 PCT