Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy4g1884 ATGGATCCACCAAAGAAATCTAACAAGATCAAGGACATTGTCAGGCTTCAACAGATCCTCAAGAAATGGAGAAGGATTGCCAACTCTTCAAAATCAAGTGACAACAACAACAACAACAATCATAGCGGCAGCACCAGCAGTAAAAGCATTAAGTTTCTGAAAAGGACACTTTCTTTGTCCGAGCGTGACAAAGGATCGTCAAGCAATGCGGTTCCAAAAGGCTACTTAGCTGTTTGCGTCGGACTAGAGCTCAAGAGATTTGTCATACCAACTGTATATTTGGGTCACCAAGCCTTTCACATGTTGCTAAGAGAAGCTGAAGAAGAGTTCGGGTTTGAGCAGACCGGCGTTCTGAGGATTCCTTGTGAAGTATCTGTGTTCGAGAGTGTCCTGAAGATGGTGGAGGAAAAGGACAAGTTTTCGGCTCACAATTGCGGATTATTCAGTGTAGAAAAGATGATGATGGGGTACTGCTCCTTCAATCAGCTTACTTATTCGCATCATCCTCAAAGTCCTATGTGCAGATAG 528 0.4356 MDPPKKSNKIKDIVRLQQILKKWRRIANSSKSSDNNNNNNHSGSTSSKSIKFLKRTLSLSERDKGSSSNAVPKGYLAVCVGLELKRFVIPTVYLGHQAFHMLLREAEEEFGFEQTGVLRIPCEVSVFESVLKMVEEKDKFSAHNCGLFSVEKMMMGYCSFNQLTYSHHPQSPMCR* 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy4g1884 175 Pfam Auxin responsive protein 22 134 IPR003676 GO:0009733
Ahy4g1884 175 MobiDBLite consensus disorder prediction 27 48 - -
Ahy4g1884 175 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 6 175 IPR003676 GO:0009733
Ahy4g1884 175 PANTHER OSJNBA0060N03.10 PROTEIN 6 175 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy4g1884 Ahy-Chr4 109629709 109631457 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy4g1884 5 175 Calmodulin-binding Proteins AT2G24400 56.150 2.01e-58 179
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy4g1884 K14488 - aprc:113865930 241.506