Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy4g1876 ATGGCCACAGACACTTCTCCGAACTTTCAGGCGGTCATTCCCACTACTGAATTCCACATAAAACTTTCACTACCAACACCAGATCACGATGGCTTGGAGTTCTGGCAGTACATGGTTGCAGGTTCAATAGCAGGATCAGTGGAGCACATGGCTATGTTCCCAGTTGACACTCTCAAGACCCGCATGCAAGCTCTTACAACAACCACCACCACCACTTCATGCCTCCGCCAATCCCTCTCTTCCATCCTCAAACTCGAAGGTCCTTCCTCCCTCTACCGCGGCATCTCCGCCATGGCCCTCGGTGCAGGCCCCGCCCACGCCGTTTACTTCTCCGTCTACGAGTTCTGCAAACAAGCCTTCTCCTCCTCTTTCACCACCAACAATTACTCCTCACTGGTGCATGCCGCTTCTGGTGTCTGCGCTACAGTCACCAGCGACGCCGTTTTCACTCCCATGGACGTCGTGAAGCAGAGGCTTCAGCTGAAGAGCAGTCCGTACAAGGGTGCGGTGGATTGCGTGAGGAGAGTGGCCCTCGAAGAAGGGGTTGGCGCGTTTTTTAAGTCGTATCGGACTACGGTTGTGATGAACGCTCCGTTTACGGCGGTGCATTTTGCGACGTATGAGGCGACAAAGAAGGGGTTGGTGGAGGTGCCTCCGGAGAGTGCGGATGACAGGAGGTGGGTGGTTCATGCTACCGCTGGTGGTGCTGCCGGAGCCCTGGCTACTGTTGTCACAACCCCGCTTGATGTTGTCAAAACTCAACTTCAGTGCCAGGGTGTTTGTGGATGTGACAGATTCTCTAGTAATGCAATTGGGCATGTAATTCAAACAGTGATAAGAAAAGATGGATATAGAGGTCTCATGAGAGGTTATGTCCCTAGGATGCTGTTTCATGCCCCTGCAGCTGCAATTTGTTGGTCCACTTACGAGGCATCCAAATCTTTCTTACACCTCATCAGGTGTACAAAGCATGGCTTAAAATTACAATGTAATTGTGGTGTAATATCGGAGCGAAACTGCAATAAATCATCGTATTATACAAATTCAAAACAATAA 1056 0.5066 MATDTSPNFQAVIPTTEFHIKLSLPTPDHDGLEFWQYMVAGSIAGSVEHMAMFPVDTLKTRMQALTTTTTTTSCLRQSLSSILKLEGPSSLYRGISAMALGAGPAHAVYFSVYEFCKQAFSSSFTTNNYSSLVHAASGVCATVTSDAVFTPMDVVKQRLQLKSSPYKGAVDCVRRVALEEGVGAFFKSYRTTVVMNAPFTAVHFATYEATKKGLVEVPPESADDRRWVVHATAGGAAGALATVVTTPLDVVKTQLQCQGVCGCDRFSSNAIGHVIQTVIRKDGYRGLMRGYVPRMLFHAPAAAICWSTYEASKSFLHLIRCTKHGLKLQCNCGVISERNCNKSSYYTNSKQ* 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy4g1876 351 Gene3D Mitochondrial carrier domain 9 217 IPR023395 -
Ahy4g1876 351 Gene3D Mitochondrial carrier domain 218 338 IPR023395 -
Ahy4g1876 351 SUPERFAMILY Mitochondrial carrier 30 310 IPR023395 -
Ahy4g1876 351 PANTHER MITOFERRIN-LIKE 1 318 - -
Ahy4g1876 351 ProSiteProfiles Solute carrier (Solcar) repeat profile. 32 119 IPR018108 -
Ahy4g1876 351 ProSiteProfiles Solute carrier (Solcar) repeat profile. 225 315 IPR018108 -
Ahy4g1876 351 ProSiteProfiles Solute carrier (Solcar) repeat profile. 129 213 IPR018108 -
Ahy4g1876 351 Pfam Mitochondrial carrier protein 226 316 IPR018108 -
Ahy4g1876 351 Pfam Mitochondrial carrier protein 130 215 IPR018108 -
Ahy4g1876 351 Pfam Mitochondrial carrier protein 32 122 IPR018108 -
Ahy4g1876 351 PRINTS Mitochondrial carrier protein signature 94 114 IPR002067 GO:0055085
Ahy4g1876 351 PRINTS Mitochondrial carrier protein signature 37 50 IPR002067 GO:0055085
Ahy4g1876 351 PRINTS Mitochondrial carrier protein signature 234 256 IPR002067 GO:0055085
Ahy4g1876 351 PRINTS Mitochondrial carrier protein signature 186 204 IPR002067 GO:0055085
Ahy4g1876 351 PRINTS Mitochondrial carrier protein signature 50 64 IPR002067 GO:0055085
Ahy4g1876 351 PRINTS Mitochondrial carrier protein signature 144 162 IPR002067 GO:0055085
Ahy4g1876 351 PANTHER MITOFERRIN-1-RELATED 1 318 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy4g1876 Ahy-Chr4 109514931 109519979 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy4g1876 6 317 Chloroplast and Mitochondria Gene Families AT1G07030 64.856 1.49e-142 405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy4g1876 K15113 - tcc:18597466 456.832