Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy4g1860 ATGAAAATGAAGATGCAATCGTATTGCATATTCCTACTACTGTTTCTGATTCTTTTTACTTCACCAAAACCAGTGCTATCTGATGACACTTCATTCAATGATGATGTTTTGGGTTTGATTGTGTTCAAAGCCGGTTTGGATGATCCAAAGGGTAAACTTTCTTCATGGAATGAAGATGATTTAACCCCTTGCAATTGGGATGGTGTGGATTGTGACCTCTCAACAAAAAGGGTCAATTCCCTTGTTCTTGATGGTTTCTCTCTTTCTGGCCATGTTGATAGAGGACTCTTGAGGCTTCAAAATCTAAAGATTCTCTCACTTGCAAGGAACAACTTCACTGGCACCATAAACCCTGATCTTCCTTCATCACTTGGTGGATTGCAAGTTGTTGACTTTAGTGACAACAATCTCTCTGGTTCAATCCCTGAAGGGTTCTTCAACCAATGTGGCTCTCTTAGAACAGTTTCCTTTGCCAAGAACAACCTCACAGGTAAGGTTCCTGATTCCTTGAGCTCATGCTCCACATTGGTGAATGTTAACTTTTCATACAATCAAATTTCTGGTATATTGCCATCTGGGGTGTGGTTCTTGAGGGCAATACAGTCATTTGATCTGTCAAATAACTTGCTTGAAGGAGAGATTCCTGAGGGAATTAAGAATCTGTATGATTTGAGGGAGTTGAATTTGCAGAATAATCACTTTAGTGGAAAGATTCCTGAAGAAATTGGAGGGTGCTTGGTTTTGAAATCAGTGGATTTGAGTGGTAATTTTCTCTCTGGGGAACTTCCTGAGTCAATGCAAAGACTCACTTCATGCACATCACTCAGTTTGCAGAGAAATTCCCTCACCGGAACCATTCCTGATTGGATTGGAGGGTTGAAAAGTCTAGAGATTTTGGATCTTTCAGCTAATGAACTTTCCGGTTGGATTCCGAAATCATTAGGGAATTTAGACTCACTGCTTAGGTTGAATTTGTCCAGGAATCAGTTCACAAGAAACTTGCCGTTTTCGATGGCGAATTGTTCTAAGCTTTCGACATTCGACATAAGCCAGAATGAATTTTCAGGCCATATTCCTTGGTGGATATTCATAATGGGTTTTCAAGGTTCACCTTTCCATGATCTTGAAGTGTTGGATTTGTCATCCAATGCATTTTCTGGTGAGCTTCCATATGGCATTGGGAACCTTAGCAGTTTGCAAGTGTTGAATGTTTCCGGCAACAATATCTCTGGCTCGATTCCTGTGACCATAGGAGAACTCAAATCTTTATACATTCTTGATTTGAGTGACAACAAGATTAATGGAAGCATTCCTTCTGAAATTCAAGGTGCACGTTCACTCAGTGAATTGAGGCTACAAAGGAACTTCCTAAGTGGGAGAATTCCAGCCGAAATCGACAAGTGTTCATCTTTAACATCTTTGATACTTTCTCACAACAAGCTTACTGGTTCAATCCCAGCATCAATTGCAAACCTCACAAATCTTCAATATGTTGATTTGTCATGGAATGAAGTCTCTGGAGGTTTACCGAAGGAGCTTACAAATCTTTCACACCTTCTTGGTTTTAATGTATCCTACAACCAGCTTCAGGGTGAGCTACCAGTGGGTGGATTCTTCAACACCATCTCACCCTCATCTGTCTCCGGCAACTCATTGTTATGTGGTTCTGTTGTCAATCAATCCTGTCCATCCGACCACCCGAAACCTATTGTCTTAAACCCGAATTCTTCAAGTTCCAACTCCAGCATTTCGGCCCAGAATCGCCATCATAAGATCATACTCAGTATCTCAGCTCTTATTGCTATAGGAGCAGCTGCTTTTATAGCAGTTGGTGTGGTGGCTATTACAGTCTTAAACATTCATGTGCGCAATTCAATGGCTCGTTCGGCTGCTCAGTTTGCATTCTCTGGTGGTGAGGACTATAGTGGTTCGCCCGAAAATGATCCAAACTATGGCAAGCTTGTCATGTTTTCTGGTGATGCAGACTTTGCAGATGGAGCTCATAATCTTCTTAATAAAGACAGTGAAATAGGCCGTGGAGGATTCGGAGTTGTTTATCGCACTGTCCTTCGAGACGGCCACTCTGTTGCAATCAAGAAGCTTACAGTGTCCAGTTTGATCAAGTCCCAAGATGACTTTGAAAGGGAAGTGAAAAATCTCGGCAAGGTTAGACACCAAAACCTGGTGACACTCGAAGGCTATTACTGGACTTCATCTTTGCAGCTTCTCATTTATGAGTACTTATCCAAAGGGAGTTTGCATAAACTCCTCCATGATGATAATAACAGCAAAGATGTCTTTTCTTGGAGACAAAGGTTCCGGATTATTCTCGGCATGGCGAAAGGATTAGCTCATTTGCACCAGATGGACATAATACATTACAATCTTAAGTCAACCAATGTACTGATTGATTGTTCCAGCGAGGCGAAAATAGGAGATTATGGCCTAGTAAAGCTATTGCCAATGCTAGACCATTGTGTTTTGAGCAGCAAAATTCAAAGCGCGCTCGGCTACATGGCTCCGGAGTTTGCTTGCCGAACAGTTAAGATAACCGAGAAATGTGATGTGTATGGCTTTGGAATCCTTGTTCTTGAGGTGGTGACCGGAAGAAGGCCTGTGGAATACATGGAGGATGATGTGGTTGTTCTTTGTGACATGGTGAGAGGTGCATTGGAGGAAGGCAAGGTTGAGCAATGTGTTGATGGGAGGCTACTTGGTAATTTCGCAGCCGAAGAAGCAATTCCTGTGATCAAATTGGGGTTGATTTGTGCCTCACAAGTGCCGTCGAACCGGCCGGATATGGCCGAGGTAATCAACATACTAGAGTTAATCCAATGCCCTTCAGAAGGACAAGAGGAGTTAGAATGA 2868 0.4226 MKMKMQSYCIFLLLFLILFTSPKPVLSDDTSFNDDVLGLIVFKAGLDDPKGKLSSWNEDDLTPCNWDGVDCDLSTKRVNSLVLDGFSLSGHVDRGLLRLQNLKILSLARNNFTGTINPDLPSSLGGLQVVDFSDNNLSGSIPEGFFNQCGSLRTVSFAKNNLTGKVPDSLSSCSTLVNVNFSYNQISGILPSGVWFLRAIQSFDLSNNLLEGEIPEGIKNLYDLRELNLQNNHFSGKIPEEIGGCLVLKSVDLSGNFLSGELPESMQRLTSCTSLSLQRNSLTGTIPDWIGGLKSLEILDLSANELSGWIPKSLGNLDSLLRLNLSRNQFTRNLPFSMANCSKLSTFDISQNEFSGHIPWWIFIMGFQGSPFHDLEVLDLSSNAFSGELPYGIGNLSSLQVLNVSGNNISGSIPVTIGELKSLYILDLSDNKINGSIPSEIQGARSLSELRLQRNFLSGRIPAEIDKCSSLTSLILSHNKLTGSIPASIANLTNLQYVDLSWNEVSGGLPKELTNLSHLLGFNVSYNQLQGELPVGGFFNTISPSSVSGNSLLCGSVVNQSCPSDHPKPIVLNPNSSSSNSSISAQNRHHKIILSISALIAIGAAAFIAVGVVAITVLNIHVRNSMARSAAQFAFSGGEDYSGSPENDPNYGKLVMFSGDADFADGAHNLLNKDSEIGRGGFGVVYRTVLRDGHSVAIKKLTVSSLIKSQDDFEREVKNLGKVRHQNLVTLEGYYWTSSLQLLIYEYLSKGSLHKLLHDDNNSKDVFSWRQRFRIILGMAKGLAHLHQMDIIHYNLKSTNVLIDCSSEAKIGDYGLVKLLPMLDHCVLSSKIQSALGYMAPEFACRTVKITEKCDVYGFGILVLEVVTGRRPVEYMEDDVVVLCDMVRGALEEGKVEQCVDGRLLGNFAAEEAIPVIKLGLICASQVPSNRPDMAEVINILELIQCPSEGQEELE* 956
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy4g1860 955 Pfam Leucine rich repeat 445 504 IPR001611 GO:0005515
Ahy4g1860 955 Pfam Leucine rich repeat 273 330 IPR001611 GO:0005515
Ahy4g1860 955 ProSiteProfiles Protein kinase domain profile. 671 944 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy4g1860 955 PANTHER LEUCINE-RICH RECEPTOR-LIKE KINASE FAMILY PROTEIN 10 946 - -
Ahy4g1860 955 Pfam Protein kinase domain 672 879 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy4g1860 955 SMART LRR_typ_2 99 123 IPR003591 -
Ahy4g1860 955 SMART LRR_typ_2 396 420 IPR003591 -
Ahy4g1860 955 SMART LRR_typ_2 317 341 IPR003591 -
Ahy4g1860 955 SMART LRR_typ_2 197 220 IPR003591 -
Ahy4g1860 955 SMART LRR_typ_2 293 316 IPR003591 -
Ahy4g1860 955 SMART LRR_typ_2 221 245 IPR003591 -
Ahy4g1860 955 SMART LRR_typ_2 124 148 IPR003591 -
Ahy4g1860 955 SMART LRR_typ_2 492 515 IPR003591 -
Ahy4g1860 955 SMART LRR_typ_2 516 540 IPR003591 -
Ahy4g1860 955 Pfam Leucine rich repeat N-terminal domain 33 72 IPR013210 -
Ahy4g1860 955 SUPERFAMILY Protein kinase-like (PK-like) 672 945 IPR011009 -
Ahy4g1860 955 SUPERFAMILY RNI-like 274 531 - -
Ahy4g1860 955 Gene3D Ribonuclease Inhibitor 32 251 IPR032675 -
Ahy4g1860 955 Gene3D Phosphorylase Kinase; domain 1 660 747 - -
Ahy4g1860 955 Gene3D Ribonuclease Inhibitor 252 314 IPR032675 -
Ahy4g1860 955 Pfam Leucine Rich Repeat 224 245 IPR001611 GO:0005515
Ahy4g1860 955 Gene3D Transferase(Phosphotransferase) domain 1 748 948 - -
Ahy4g1860 955 Gene3D Ribonuclease Inhibitor 315 569 IPR032675 -
Ahy4g1860 955 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 10 946 - -
Ahy4g1860 955 Pfam Leucine Rich repeat 397 411 IPR001611 GO:0005515
Ahy4g1860 955 ProSitePatterns Protein kinases ATP-binding region signature. 677 700 IPR017441 GO:0005524
Ahy4g1860 955 SMART LRR_sd22_2 492 518 - -
Ahy4g1860 955 SMART LRR_sd22_2 293 319 - -
Ahy4g1860 955 SMART LRR_sd22_2 420 443 - -
Ahy4g1860 955 SUPERFAMILY L domain-like 50 362 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy4g1860 Ahy-Chr4 109051946 109056395 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy4g1860 12 954 Receptor kinase-like Gene Family AT3G56370 60.920 0.0 1111
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VII-1 Ahy4g1860 Pkinase 3.70E-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy4g1860 - - gmx:100813535 1503.03
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy14g2133 14 119504715 119509103 Ahy4g1860 4 109051946 109056395 hybridization
Ahy4g1860 4 109051946 109056395 Ahy12g2236 12 108947224 108951945 PCT
Ahy4g1860 4 109051946 109056395 Ahy2g1934 2 93480026 93484571 PCT
Ahy12g2236 12 108947224 108951945 Ahy4g1860 4 109051946 109056395 PCT
Ahy2g1934 2 93480026 93484571 Ahy4g1860 4 109051946 109056395 PCT