Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy4g1839 ATGTCTAATGAGGATTATGTAGATGACACCAATAATGTTGACGGGTTTCACGGGAATTTGGAGAATCCCTTGAGAAACAGTGATGAGCTCCTGGACGACGATATCTTCATGGATGCTAACTTGGCAAATGCAGAAGTTGGTGCTTCTGAATCCAATGAAGGTACCCATTTTGATCAATTGGATGAATCTTATAAGATTGACGGGTGGGAGGACATAGGAAAGACTGAGTTCTTGAATATTGTAGATGTTGATATAAAAAGATATCATTTCAGTGATCTAGGAGTGGCTTTTGATTTCTACAATGCATTTGCCAAGTCAAAGGGATTTAGTGGTCGAAAAAGTAAGACGCGAAAGCACAATGGGATAATCAATCGACAGAATTTTGTTTGTTGTCGCGAGGGCTTCCGACGAAAAAAGGCAGATAATATGCATACCAGAAAACAAGAGCCTAGAGCTGAAACTAGATGTGGCTGTAAGGCAAAGGTTCAGGTGTCATTTGACGTTGTTAGTGGTCGCTGGATTGTTTCAAAATTTTCTGATTTGCACAATCATGACCTTCTTCCTCCAATTTTTACTGCAATGCTTCCTGGTCACAGAAAAATACCTGCTGCAGATATTGAGCAAATAAATATAATGAGGAAGGGTGGATTAGGCACTGCACATATTTTTGCAGCACTCTCAAGCCAATCTGGTGGTCACCACAATGTTCCCTTTTTGCCCAGGGACTTGTACAATCAAGTCGCACAGCAACGTCGACGATTGAAGGGTGATGCTAGTGCAGCTCTTCAATTTTTGAGGAAGATGAAGTCCATTGATCCTGTCATGGTTATAAGATATGAGGTTGATAGGTTTCACTCGATAAAGAATTTATTTTGGTGTGATGGAATAAGCCAAATGGATTATCAATTGTTTGGTGATGTATTGGCTTTTGACGCTACTTACAAGAAGAACAAATATCATTGTCCGCTTGTCGTTTTTTCGGGTGTTAATAACCATAACCGCACAGTTGTCTTTGCGGCCGCTCTTGTGTGTGATGAGTCAGAGCAAACATATATTTGGTTGTTAAAAAGTTTACTGGAAGCAATGAAGGGGAAGGCCCCAATTTCAGTTATCACAGATGGTGCCCTTTCAATGAAAAATGCAATCGAAAAAATTTTTCCTAATGCACATCATCGCCTATGTGCTTGGCACCTTATTCGCAATGCCACAAGTAATGTAGGTAATCCTAGGTTCACATCGCAGTTTAAGAAGTGCATGCTGGGTGATTACGAGGTTGGTGTATTCCGTAGTAAGTGGGATCGGATGGTTGAAGAGTTTGATGTGCAAGACAAGCAATGGATAATTGATATGTATGATAACCGTCATAGTTGGGCAACAGCACATATCCGTGGGAAGTTCTTTGCTGGGTTTAGGACCACTTCTCGATGTGAGGGGTTGCACTCAGTTATTGCAAAGTATGTCAAGTCCAGGTATAATTTAAGAGATTTTGTAGAGCACTTTGATAGATGTGTTGCCTACATTCGTTTCAAAGATAGTCTAGCAGACTTTGAATGTGCACATGGAGTACCTGTGATGCAAACTCATTTATTGTCATTGGAGAAGTCTGCAGCTAATTTATATACAAGAGAGGTATTTTTTCTATTTCGCCCTATTATTATAAGGTCTGGTTCAATGAAAGTGTTAGATTGCATTGATGTTGGTTCTTATATGTTATACACGGTGGTTAAGTATGGTAGTCCTAACGATACATGGCAAGTATCTTTCTGTGATTTACCAATGGAGTTTACTTGCTCCTGTATGAGGATGGAGTCATTTGGCATTCCTTGCGAACACATTCTATCTGTTTTAGTTACACTTGACATTTGTGAATTGCCAAAATGTTTAGTTCTAGATAGGTGGACCAAAAATGTGAAACAACAAATACAAGATACAAAGGGGTTCACTTGGGATTGCTTAAAGTCTACCCAATACTGGTGTTTGATGGACTGGTTTAGATTGGTGGCTACACTATCAGCAGGTAAAGATGATAGGTTCAGGAGCATGAGGGATTGGGCGATAAACACAGTGGATAAAATGAAAGCCGATGATACTGCTAGTGCAGTTGCTTCTAATAGTGCAATTCCTGCCACTCATACAGATCCTCGTGACCCCCCAATTCGTAGAAGAGCTAAGGATCGTGCCGGACAACGGTGTAGTATATGCCAGGAGCTCGGACATAACAAAACTACATGTCCAGATCGGAGTAAGTATGATAGGGGTTCACATGAACGGCATAGTCTACCTACAGATGATGATGCATATGAGGCTATGTGGGATGAGGAAGAAGACTTCATTTATGAGGAAGATGAAGGTGAATGTGCGGTAAATTCTAGTTCTGAATCTAGCAGAGATCAAGATATGGAGATAGATGACTCTAATTATGAATTTGGAAATGAGGACGATGGAGCCAATGAAATTAATTAG 2463 0.4032 MSNEDYVDDTNNVDGFHGNLENPLRNSDELLDDDIFMDANLANAEVGASESNEGTHFDQLDESYKIDGWEDIGKTEFLNIVDVDIKRYHFSDLGVAFDFYNAFAKSKGFSGRKSKTRKHNGIINRQNFVCCREGFRRKKADNMHTRKQEPRAETRCGCKAKVQVSFDVVSGRWIVSKFSDLHNHDLLPPIFTAMLPGHRKIPAADIEQINIMRKGGLGTAHIFAALSSQSGGHHNVPFLPRDLYNQVAQQRRRLKGDASAALQFLRKMKSIDPVMVIRYEVDRFHSIKNLFWCDGISQMDYQLFGDVLAFDATYKKNKYHCPLVVFSGVNNHNRTVVFAAALVCDESEQTYIWLLKSLLEAMKGKAPISVITDGALSMKNAIEKIFPNAHHRLCAWHLIRNATSNVGNPRFTSQFKKCMLGDYEVGVFRSKWDRMVEEFDVQDKQWIIDMYDNRHSWATAHIRGKFFAGFRTTSRCEGLHSVIAKYVKSRYNLRDFVEHFDRCVAYIRFKDSLADFECAHGVPVMQTHLLSLEKSAANLYTREVFFLFRPIIIRSGSMKVLDCIDVGSYMLYTVVKYGSPNDTWQVSFCDLPMEFTCSCMRMESFGIPCEHILSVLVTLDICELPKCLVLDRWTKNVKQQIQDTKGFTWDCLKSTQYWCLMDWFRLVATLSAGKDDRFRSMRDWAINTVDKMKADDTASAVASNSAIPATHTDPRDPPIRRRAKDRAGQRCSICQELGHNKTTCPDRSKYDRGSHERHSLPTDDDAYEAMWDEEEDFIYEEDEGECAVNSSSESSRDQDMEIDDSNYEFGNEDDGANEIN* 821
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy4g1839 820 ProSiteProfiles Zinc finger SWIM-type profile. 572 620 IPR007527 GO:0008270
Ahy4g1839 820 MobiDBLite consensus disorder prediction 744 765 - -
Ahy4g1839 820 Pfam FAR1 DNA-binding domain 98 188 IPR004330 -
Ahy4g1839 820 SMART 26again6 595 622 IPR006564 GO:0008270
Ahy4g1839 820 Pfam MULE transposase domain 307 401 IPR018289 -
Ahy4g1839 820 PANTHER OS02G0262500 PROTEIN 89 650 - -
Ahy4g1839 820 Pfam SWIM zinc finger 595 616 IPR007527 GO:0008270
Ahy4g1839 820 MobiDBLite consensus disorder prediction 744 767 - -
Ahy4g1839 820 MobiDBLite consensus disorder prediction 780 820 - -
Ahy4g1839 820 MobiDBLite consensus disorder prediction 697 727 - -
Ahy4g1839 820 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 89 650 IPR031052 GO:0006355
Ahy4g1839 820 SUPERFAMILY Retrovirus zinc finger-like domains 717 751 IPR036875 GO:0003676|GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy4g1839 Ahy-Chr4 108443666 108446502 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Ahy4g1839 MULE 2.00E-27 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy4g1839 - - adu:107465142 1692.55