Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy4g1836 ATGGCTGAGAGTGGAAATGAATTGTCGAATGAAGAAGCCGGTGAGTATGGAGATCTATTGCAGTTGAATAAGGAAGATATAATGAACAAGGCATTCCGTAGCGATGAAGCAGCATATGAATTTTACAGGAGGTTAGGCAAATGTTTTGGTTTTGGTATTCGAAAGGGTGACTCGGGAAAAGATGACAGTGGAAGGGTTATTCGTCGTAGATTTTTTTGTAATAGAGCGGGCCTGAGAGAACGTCGTCACTATGATAGGCTAGATAGGCAGAGAAGTCATAGACCAGAAACCCGGACAAATTGTGAGGCAAAGTTGTCAGTCTACCTTGATGTGGTCAGTGGGATATGGAGGGTGAGGAAAATTGTATTGGATCATAACCACGATTTAACTCCGGCATATATGGTTCATATGATGACGAATTTTAGAGAAATAACTTGTTCCGCTAAGGCACAAATATCTGGTATGCAGGCTCATGGTGTTCCGACGTCTAAGATTCTGGGGTATATGGCCGGACAGTCTGGTGGCTATTCTCTAATGGGCTTCACTAAGAAGGATGCTTACAATTATATTAACAAGGCTAAGCGTGCAAAGATTATTGATGGGGACGCTAACGCCGCTGTTGTATACTTGGAGGGGAAAGCGGGGGCAGATCCGATGTCGATGGCTAGGTATAATCTTACTAAGGATAATATGCTAGCCAATATGTTTTGGGCGGATGGTGGCAGTAGAGTTGATTACCAATACTTTGGGGATGTTCTAGCATTTGATTCGACCTACAAGAAAAATAAATATCAAAGACCGCTGGTGATCTTTTCTGGTGTGAATAACCATAAGCAGACGACAATATTTGGGTTTGGCGTGGTGTTAGATGAAAGCGTTGGGTCTTATAAGTGGTTGTTGGAAAATTTGTTGGAAGTCATGTGTAACAAGAAGCCGTCGGTTGTCGTCACGGATGGGTGTGATTCAATGAAAGCTGCAGTGAAGTCTGTGTTTCCGGAGGCAACGCATCGATTGTGTGCTTGGCATATGGAGAAGAATGTAACCGCTAATGTGAGGGAAGAGGGACTGCGGCAATGTTTCACCCGGTGGCTGTATTCAGAGATGGAAATAGATGAATTTGAGGCTGAGTGGGATGATGCTATTGAAGAGTATGGGTTGCAAAACAGTTTTTGGGCCAAAGAAACTTTTCAGAAGAGGATGATGTGGGCTAATGCATATCTACAGGACAAGTTCTGTGCAGGGTTTCGGACAACGTCCCGGTGTGAAGGCATTAACGCGTACGTGAAGAATTTTCTTAAGTCTAGGCACAGTCTCCTTGATATGGTTAAAAATTTGGAGTTGGTCCTGCGAGAGTACCGAAATAACGAATTAGTTGCACAATTTAGGTCACTCCATGGGACGCCGGTAAAGACAACTTGTTTGGATCCTCTTGAGAGGTATGCTGCAGATGCATACACACGGGAGATATTCGTCGACGCGAAGAAGGAAATAGTGGGTGTCGGTGCAGTTAATTTTGTAGCCAAGATAAGACGCTCAACTACAATGGTGTACACGTTGGAGGAATATGGTGACCCAGGTAGAGAGGTGATTGTGTTGTACGATAGGGTTTCAAGGAAAATGGAGTGCGCATGCAATTTTTGGAGGCAAAAGGGAATACCTTGTAGACATATGTTTTTTGTAATGAAGCATGAGCACTTGACTCGAATTCCTGAGAGCCTGGTTCTGAAGAGATGGCGAAAGGATGCAAAGTCGTTGGATAAGTATGGTGAGATCACGGAAGTTGGTAGTGAAGTTGGTTTCTTGTTGCGCCATGGTGCACTTCATGCAGCCGCACAGTGGATGCTATATGTTGGAGCCAGGAGCCCTTTATGTTTCACACAGGCGCTTAACGGTCTCCATGCGCTGTGTCAAGAACTAGATAGAGGCCCTGAAAGTGGGGGTCAGAGGAAAGCTGTTGATATGGTTGACTTACACGACCCTGTTGTTGCGAAGACTAAGGGTGCCCCTCGTGTGAGGAGGCAGGGCGGACGCAAAAGGCGCTGCACCCGTTGCCGCAAAATGGGTCACACAAAACGACATTGCAATGCCGACCAATCCTTTGTTTCCAAGGCTGGAGAGAGCAAAGATTTTGAGGCTACAAATTTAGGATCGGAGGGGTCTTCGCCGACGGAAAGGGTCCGATTCGAACAAGGCAAGAAGGGTGTTACTGGACCCAATAATTTGTGTGCACCAGTTTGGTTGGAGGCATCAGGTTCGAAGATTAGTTTACAACATGAAATTGCTGCTGCAACTGGACATAAGGAGACTATGGAATGGGAGACAAACATGATACGTAACACCGATGAAGTAATAGCACAGCTGATGACTGATGTAACTTATCTCAGTTCAAGATTGGGTTCGAGCTTCGCAGCATAA 2415 0.4522 MAESGNELSNEEAGEYGDLLQLNKEDIMNKAFRSDEAAYEFYRRLGKCFGFGIRKGDSGKDDSGRVIRRRFFCNRAGLRERRHYDRLDRQRSHRPETRTNCEAKLSVYLDVVSGIWRVRKIVLDHNHDLTPAYMVHMMTNFREITCSAKAQISGMQAHGVPTSKILGYMAGQSGGYSLMGFTKKDAYNYINKAKRAKIIDGDANAAVVYLEGKAGADPMSMARYNLTKDNMLANMFWADGGSRVDYQYFGDVLAFDSTYKKNKYQRPLVIFSGVNNHKQTTIFGFGVVLDESVGSYKWLLENLLEVMCNKKPSVVVTDGCDSMKAAVKSVFPEATHRLCAWHMEKNVTANVREEGLRQCFTRWLYSEMEIDEFEAEWDDAIEEYGLQNSFWAKETFQKRMMWANAYLQDKFCAGFRTTSRCEGINAYVKNFLKSRHSLLDMVKNLELVLREYRNNELVAQFRSLHGTPVKTTCLDPLERYAADAYTREIFVDAKKEIVGVGAVNFVAKIRRSTTMVYTLEEYGDPGREVIVLYDRVSRKMECACNFWRQKGIPCRHMFFVMKHEHLTRIPESLVLKRWRKDAKSLDKYGEITEVGSEVGFLLRHGALHAAAQWMLYVGARSPLCFTQALNGLHALCQELDRGPESGGQRKAVDMVDLHDPVVAKTKGAPRVRRQGGRKRRCTRCRKMGHTKRHCNADQSFVSKAGESKDFEATNLGSEGSSPTERVRFEQGKKGVTGPNNLCAPVWLEASGSKISLQHEIAAATGHKETMEWETNMIRNTDEVIAQLMTDVTYLSSRLGSSFAA* 805
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy4g1836 804 Coils Coil 435 455 - -
Ahy4g1836 804 PANTHER OS03G0181600 PROTEIN 30 587 - -
Ahy4g1836 804 SMART 26again6 540 567 IPR006564 GO:0008270
Ahy4g1836 804 Pfam MULE transposase domain 252 346 IPR018289 -
Ahy4g1836 804 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 30 587 IPR031052 GO:0006355
Ahy4g1836 804 ProSiteProfiles Zinc finger SWIM-type profile. 527 565 IPR007527 GO:0008270
Ahy4g1836 804 Pfam FAR1 DNA-binding domain 40 130 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy4g1836 Ahy-Chr4 108395404 108399157 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Ahy4g1836 MULE 6.20E-28 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy4g1836 - - aip:110265238 1235.71