Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy4g1835 ATGAGTTTCAGAGAAGAATCGGTTCCGGAAAGCACTGAGTCAAAATCAGTGAAGCAAAATGGGTTCATAACAGATACTCAGTTAACAATCGATGAGAGCCTTTTGGTTGATCCAAAACTTCTGTTTATAGGGTCCAAGATTGGTGAGGGAGCTCATGGTAAAGTCTATGAAGGAAGGTATGGAGAGAGAATTGTTGCAATCAAAGTTTTAAATCGTGGGAGCACTTCTGAAGAAAGAGCTGCCCTTGAAAATCGGTTTGCTCGGGAAGTTAATATGATGTCTCGTGTCCATCATGAGAATCTTGTTAAGTTTATTGGAGCTTGTAAGGATCCTTTGATGGTGATCGTTACAGAATTATTGCCTGGGATGTCACTGAGGAAATACTTAACAAGTATCCGTCCGAAGTTACTAGACCTTCATGTTGCTATAAACTTTGCCCTTGATATTGCTCGGGCCATGGATTGGCTACATGCCAACGGGATCATACATAGAGATCTGAAGCCTGACAATCTGTTGCTTACGGCAAATCAGAAGTCTGTTAAACTTGCAGATTTTGGTCTCGCAAGAGAAGAATCCGTGACTGAAATGATGACAGCAGAAACCGGAACTTACCGATGGATGGCACCAGAGTTGTATAGTACCGTGACATTGCGCCAGGGAGAGAAAAAGCACTACAACAACAAGGTTGATGTGTATAGCTTTGGTATTGTTTTGTGGGAGCTACTAACAAACCGCATGCCTTTCGAAGGGATGTCGAATTTACAGGCTGCTTATGCTGCTGCATTTAAGCAAGAGAGGCCTAGCATGCCTGAAGATATATCCCCGGATCTCGCCTTCATCATACAATCATGCTGGGTTGAAGATCCTAACCTGAGACCGAGTTTTAGTCAGATCATTCGCATGCTCAATGCATTTCTCTTCATGCTTTCGCCACCGTCTCCTCCCATGCAAGAGCCTGATGAAATCGAGCCTGAGGAAGCGACGACAAGTAATGGTACCATTACTCAGTATTCCGCCCGGAACAGAGGGAAGTTCGCTTTTATTCGCCATTTGTTTTCTTCAAAGAGGACCAAAAACTAA 1080 0.4361 MSFREESVPESTESKSVKQNGFITDTQLTIDESLLVDPKLLFIGSKIGEGAHGKVYEGRYGERIVAIKVLNRGSTSEERAALENRFAREVNMMSRVHHENLVKFIGACKDPLMVIVTELLPGMSLRKYLTSIRPKLLDLHVAINFALDIARAMDWLHANGIIHRDLKPDNLLLTANQKSVKLADFGLAREESVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRMPFEGMSNLQAAYAAAFKQERPSMPEDISPDLAFIIQSCWVEDPNLRPSFSQIIRMLNAFLFMLSPPSPPMQEPDEIEPEEATTSNGTITQYSARNRGKFAFIRHLFSSKRTKN* 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy4g1835 359 SUPERFAMILY Protein kinase-like (PK-like) 39 323 IPR011009 -
Ahy4g1835 359 PANTHER SERINE-THREONINE PROTEIN KINASE 9 329 - -
Ahy4g1835 359 SMART serkin_6 41 306 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy4g1835 359 CDD STKc_MAP3K-like 47 302 - -
Ahy4g1835 359 ProSitePatterns Serine/Threonine protein kinases active-site signature. 161 173 IPR008271 GO:0004672|GO:0006468
Ahy4g1835 359 PANTHER SERINE/THREONINE-PROTEIN KINASE HT1-LIKE 9 329 - -
Ahy4g1835 359 Gene3D Phosphorylase Kinase; domain 1 29 120 - -
Ahy4g1835 359 Gene3D Transferase(Phosphotransferase) domain 1 123 338 - -
Ahy4g1835 359 ProSitePatterns Protein kinases ATP-binding region signature. 47 68 IPR017441 GO:0005524
Ahy4g1835 359 Pfam Protein tyrosine and serine/threonine kinase 43 302 IPR001245 GO:0004672|GO:0006468
Ahy4g1835 359 PRINTS Tyrosine kinase catalytic domain signature 273 295 IPR001245 GO:0004672|GO:0006468
Ahy4g1835 359 PRINTS Tyrosine kinase catalytic domain signature 155 173 IPR001245 GO:0004672|GO:0006468
Ahy4g1835 359 PRINTS Tyrosine kinase catalytic domain signature 229 251 IPR001245 GO:0004672|GO:0006468
Ahy4g1835 359 PRINTS Tyrosine kinase catalytic domain signature 117 130 IPR001245 GO:0004672|GO:0006468
Ahy4g1835 359 ProSiteProfiles Protein kinase domain profile. 41 306 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy4g1835 Ahy-Chr4 108380733 108384747 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy4g1835 29 359 MAP Kinase Kinase Kinase AT5G01850 74.366 0.0 523
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Ahy4g1835 PK_Tyr_Ser-Thr 1.40E-61 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy4g1835 - - jre:109021493 596.66
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy14g2115 14 118977569 118981319 Ahy4g1835 4 108380733 108384747 hybridization