Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy4g1833 ATGAATAAGGGGAGATTTGGAGAGTGCAATGGTAATTGTGGTGATGGAGTAGTTATGAAGCAGGCTCAGTTTGGATATGTTGAAACTGATCCTTCTGGAAGATATGGTCGTTTGAAGGATGTGCTAGGCAAAGGAGCAATGAAAACAGTGTACAGAGCATTTGATGAATACCTTGGAATAGAAGTGGCATGGAACCAAGTGCACCTTGGTGATGCATTTCATTCAGCAGAACAACTTCAACGTCTTTACTCAGAGGTTCATCTCCTCAAGCACCTCACCCACAAATCAATGATGATCTTCTATGGTTCTTGGATTGATCTCAATCGCAAAACCTTCAACTTCATCACCGAATTGTTCACTTCCGGTACCCTTAGAGAGTATAGGCAGAAGTATAGAAGAGTGGAAATGAGAGTGCTGAAGAATTGGGCACGCCAGATTCTGAGTGGATTGGAGTATTTGCACAGCAACAACCCACCTGTGATCCATAGAGACCTCAAATGTGACAATATCTTTGTCAATGGCCATTTGGGCCAAGTCAAAATTGGTGACTTAGGCCTTGCAGCTATACTTCTTAGCTCCAAACATGCTCACAGTGTTATAGGCACACCAGAGTTCATGGCACCAGAGTTGTATGAAGAAGAGTACAATGAGCTTGTAGACATATACTCATTTGGGATGTGCATGATTGAGATGCTTACTTTTGAGTTCCCATATAGTGAATGCTTCAACCCTGCTCAAATATACAAGAAAGTTATTTCGGGTAAGCTACCAAATGCATATTACAAGATCAAAGATTTTGAAGCCCAAAGATTTGTGGGGAAATGTTTGGCACATGTGTCAAAGAGGCCATCGGCAAAGGAGCTATTGTTGGACCCATTTTTGGCCATTGATGATCCAATTGCTTCACCGTTAATGCCAATCATAAAACTACCCACAAATCAAGCTTTGAAGCTTAATGCAACTGTAGAAGTTGCAAAGAGCACAGACATGACCATCACTGGGTCAATGAATGAGGTGGACATCAACACTGTTTTTCTTAAAGTCAAGATTTCTGACGCTAATGGGCACACAAGAAACGTGTTCTTTCCATTTGACACAATAAAGGACACAGCTATGGAGGTAGCCATGGAAATGGTAAAGGAACTTGAAATCAGCCACTTGGAACCATTGGATATTGCTGCAATGATAGATCATGAGGTATCAGCTTTAGTTCCAACTTGGAGGGACCCTTCTTGTTTTCATCAACAACACCAAAGACAGGATAGCTTTAACTATGAAGAAGAAGATGAAGACATAAATAACCATCATCCTTTCTTCTTACCATCATCGTCGTCGTCGTCATCATCAACAACTCCATCTTCTGGCTCACTCAACATGTCTTGTTCCTCATACAAGACCCGTTTTAATAATAATGGGAATACTTGTCCCTCTCAATGGCCTCAAGAGGATCCATTATCAATGAATGATGATGCAAGCTCTCTAAGCTCAATGAACTCCATCAAATGTTCCAATGTTCAGTACTGTGACAACTCATCATCAAGAAATGAAGAAAATGAGAACAATAATAATGTACCAACAACAACAAAAGTGTTGAAGGGCCATTTTGACGAAGGGCTATTTGAAGAAGCTAATTACACCAATAAACAACTTTGCAACCCAAGAATAAGGAACACTTGCAATAATAAAAATCATTGCATGTGTAATAATAATGGTCATGGACATGGATGGCCTAGACTAACGAGGATTCAATCTTGCGTGGAAGAGAGGAGAACCCAACATCTTCAACGTTTGATTATGTTGGAGGAGATGTGCAATTTCAAGAATAACACTGTTGGAACCATGGAGAACATTGGGTTTTTGAAACTGGAAAGAGGTCGCAGATGCTTTGGTACTCGTTGA 1899 0.4055 MNKGRFGECNGNCGDGVVMKQAQFGYVETDPSGRYGRLKDVLGKGAMKTVYRAFDEYLGIEVAWNQVHLGDAFHSAEQLQRLYSEVHLLKHLTHKSMMIFYGSWIDLNRKTFNFITELFTSGTLREYRQKYRRVEMRVLKNWARQILSGLEYLHSNNPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILLSSKHAHSVIGTPEFMAPELYEEEYNELVDIYSFGMCMIEMLTFEFPYSECFNPAQIYKKVISGKLPNAYYKIKDFEAQRFVGKCLAHVSKRPSAKELLLDPFLAIDDPIASPLMPIIKLPTNQALKLNATVEVAKSTDMTITGSMNEVDINTVFLKVKISDANGHTRNVFFPFDTIKDTAMEVAMEMVKELEISHLEPLDIAAMIDHEVSALVPTWRDPSCFHQQHQRQDSFNYEEEDEDINNHHPFFLPSSSSSSSSTTPSSGSLNMSCSSYKTRFNNNGNTCPSQWPQEDPLSMNDDASSLSSMNSIKCSNVQYCDNSSSRNEENENNNNVPTTTKVLKGHFDEGLFEEANYTNKQLCNPRIRNTCNNKNHCMCNNNGHGHGWPRLTRIQSCVEERRTQHLQRLIMLEEMCNFKNNTVGTMENIGFLKLERGRRCFGTR* 633
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy4g1833 632 MobiDBLite consensus disorder prediction 418 456 - -
Ahy4g1833 632 Gene3D Transferase(Phosphotransferase) domain 1 119 298 - -
Ahy4g1833 632 ProSiteProfiles Protein kinase domain profile. 36 294 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy4g1833 632 SMART serkin_6 36 294 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy4g1833 632 MobiDBLite consensus disorder prediction 472 493 - -
Ahy4g1833 632 CDD STKc_WNK 34 294 - -
Ahy4g1833 632 MobiDBLite consensus disorder prediction 420 435 - -
Ahy4g1833 632 MobiDBLite consensus disorder prediction 437 456 - -
Ahy4g1833 632 ProSitePatterns Serine/Threonine protein kinases active-site signature. 160 172 IPR008271 GO:0004672|GO:0006468
Ahy4g1833 632 Pfam Protein kinase domain 39 294 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy4g1833 632 SUPERFAMILY Protein kinase-like (PK-like) 38 477 IPR011009 -
Ahy4g1833 632 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 1 620 - -
Ahy4g1833 632 PANTHER WNK KINASE 1 620 - -
Ahy4g1833 632 Gene3D Phosphorylase Kinase; domain 1 20 117 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy4g1833 Ahy-Chr4 108329952 108335873 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy4g1833 24 431 MAP Kinase Kinase Kinase AT3G51630 64.678 0.0 557
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Ahy4g1833 Pkinase 2.10E-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy4g1833 K08867 - gmx:100272206 768.074
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy14g2112 14 118913358 118918177 Ahy4g1833 4 108329952 108335873 hybridization
Ahy4g1833 4 108329952 108335873 Ahy12g2209 12 108279211 108286358 PCT
Ahy4g1833 4 108329952 108335873 Ahy2g1918 2 93047366 93054458 PCT
Ahy12g2209 12 108279211 108286358 Ahy4g1833 4 108329952 108335873 PCT
Ahy2g1918 2 93047366 93054458 Ahy4g1833 4 108329952 108335873 PCT