Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy4g1830 ATGGGAAATTACAGGTTCAAATTATCAGACATGATCCCAAATGCTTGGTTCTACAAGCTTAGAGACATGAACAAATCATCATCATCATCATCATCAAGAAAGCAAAAATCACAAACTCCTCCTCTTCCTCCTCCTCCATCCAACAAGAAAACCCAACTTTCAACAACAACCTCAAATTCATCAAAACCAAAGCAGCAATTCAACAACACCACCACTCCAAGAAAGTCCTATTACTTTACAAGACAACACACCACTTCCCCTCAACAACAACCAAGAAAATCATCATCAAAACAGAGACCAACAATAAAGACTAGTAGAAGAACAACTACTCCAAGACATTCTTCTTCTGCTTCTTCTTCTAAGTTTCTTGTTATCAATGTGACGCCTACGATTAACACTACTACCTCCGATGGTGAATCAGAGTTCCAAGCAGAGCCAGAATTCAGAACAGACCGTGTTCTTCACACCGACTCTAATTCTAATTCCTCCTCGCTTGATGACATCATCATTGATGTCGACAACAACTCCATTTCCACAACAAAATCTGACATTAACAACAACAACAACAAACATCTTCCTCTTCCTCCAATTCACACCAAACCAAAGAACCAACAAGAATCTAGAAACAAGAACAAGAACGCCAACACCCCGTGTTCTAGAAGATTCTCCGTTAGCTCAGCCGCAGGGGCCAGGAGGCTTAGGATCAATTCTCCCAGAGCTTCCGGAGCAAGTTTCCGGAAACTCCATCATCAGGCGGATGCGTCAGGCGGCCAAAGAAGCACTACTTCTTCGGCGGTTACTGCCGCGTCCGCCGGACGAGGGAGGAGCGTTTCGGGAAGCTTTGCGATAGTGAAATCATCGTTGAATCCGCAGAGAGATTTCAGAGAATCGATGGTGGAGATGATTGTGCAGAACAACATAAGGAGTTCGAAGGATTTGGAGGATCTTCTTGCTTGTTACCTAACTCTGAATTCAGATGAGTATCATGGCTTAATCATCAACGTCTTCAAGCAAATTTGGTTTGATTTAACTGATAATAACAATATCAATTACATGTACCAACGACAAGAATAA 1074 0.4227 MGNYRFKLSDMIPNAWFYKLRDMNKSSSSSSSRKQKSQTPPLPPPPSNKKTQLSTTTSNSSKPKQQFNNTTTPRKSYYFTRQHTTSPQQQPRKSSSKQRPTIKTSRRTTTPRHSSSASSSKFLVINVTPTINTTTSDGESEFQAEPEFRTDRVLHTDSNSNSSSLDDIIIDVDNNSISTTKSDINNNNNKHLPLPPIHTKPKNQQESRNKNKNANTPCSRRFSVSSAAGARRLRINSPRASGASFRKLHHQADASGGQRSTTSSAVTAASAGRGRSVSGSFAIVKSSLNPQRDFRESMVEMIVQNNIRSSKDLEDLLACYLTLNSDEYHGLIINVFKQIWFDLTDNNNINYMYQRQE* 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy4g1830 357 TIGRFAM A_thal_3678: uncharacterized plant-specific domain TIGR01568 282 344 IPR006458 -
Ahy4g1830 357 MobiDBLite consensus disorder prediction 179 193 - -
Ahy4g1830 357 MobiDBLite consensus disorder prediction 25 166 - -
Ahy4g1830 357 Pfam DNA-binding domain 1 37 IPR025830 GO:0003677
Ahy4g1830 357 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 3 346 IPR038933 GO:0045892
Ahy4g1830 357 MobiDBLite consensus disorder prediction 179 271 - -
Ahy4g1830 357 MobiDBLite consensus disorder prediction 208 223 - -
Ahy4g1830 357 ProSiteProfiles OVATE domain profile. 283 342 IPR006458 -
Ahy4g1830 357 PANTHER TRANSCRIPTION REPRESSOR OFP1-LIKE 3 346 - -
Ahy4g1830 357 MobiDBLite consensus disorder prediction 49 141 - -
Ahy4g1830 357 MobiDBLite consensus disorder prediction 254 271 - -
Ahy4g1830 357 Pfam Transcriptional repressor, ovate 287 343 IPR006458 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy4g1830 Ahy-Chr4 108171889 108173246 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Ahy4g1830 Ovate 7.70E-24 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy4g1830 - - adu:107485240 603.594